RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GOLIM4O00461 696 aa17.44■□□□□ 0.38
COL6A1-202ENST00000463060 DOK7Q18PE1 504 aa17.44■□□□□ 0.38
COL6A1-202ENST00000463060 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
COL6A1-202ENST00000463060 DNAJC2Q99543 621 aaKnown RBP17.44■□□□□ 0.38
COL6A1-202ENST00000463060 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
COL6A1-202ENST00000463060 PIH1D3Q9NQM4 214 aaKnown RBP17.44■□□□□ 0.38
COL6A1-202ENST00000463060 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
COL6A1-202ENST00000463060 GOLGB1Q14789 3259 aaKnown RBP17.44■□□□□ 0.38
COL6A1-202ENST00000463060 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
COL6A1-202ENST00000463060 PPIP5K2O43314 1243 aa17.43■□□□□ 0.38
COL6A1-202ENST00000463060 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
COL6A1-202ENST00000463060 CNTROBQ8N137 903 aa17.43■□□□□ 0.38
COL6A1-202ENST00000463060 RILPL2Q969X0 211 aa17.43■□□□□ 0.38
COL6A1-202ENST00000463060 SALL1Q9NSC2 1324 aa17.43■□□□□ 0.38
COL6A1-202ENST00000463060 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
COL6A1-202ENST00000463060 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
COL6A1-202ENST00000463060 TBC1D9Q6ZT07 1266 aa17.42■□□□□ 0.38
COL6A1-202ENST00000463060 KCNQ5Q9NR82 932 aa17.42■□□□□ 0.38
COL6A1-202ENST00000463060 SCN9AQ15858 1988 aa17.41■□□□□ 0.38
COL6A1-202ENST00000463060 ECE2O60344 883 aa17.41■□□□□ 0.38
COL6A1-202ENST00000463060 CHMLP26374 656 aa17.41■□□□□ 0.38
COL6A1-202ENST00000463060 RASSF7Q02833 373 aa17.41■□□□□ 0.38
COL6A1-202ENST00000463060 C8orf34Q49A92 452 aa17.41■□□□□ 0.38
COL6A1-202ENST00000463060 WDR66Q8TBY9 1149 aa17.41■□□□□ 0.38
COL6A1-202ENST00000463060 DBNDD1Q9H9R9 158 aa17.41■□□□□ 0.38
COL6A1-202ENST00000463060 ZNF646O15015 1829 aaPredicted RBP17.41■□□□□ 0.38
COL6A1-202ENST00000463060 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
COL6A1-202ENST00000463060 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
COL6A1-202ENST00000463060 DOCK2Q92608 1830 aa17.4■□□□□ 0.38
COL6A1-202ENST00000463060 MYO5AQ9Y4I1 1855 aaKnown RBP17.4■□□□□ 0.38
COL6A1-202ENST00000463060 IGSF3O75054 1194 aa17.4■□□□□ 0.38
COL6A1-202ENST00000463060 FRAT2O75474 233 aaPredicted RBP17.4■□□□□ 0.38
COL6A1-202ENST00000463060 ARHGAP27Q6ZUM4 889 aa17.4■□□□□ 0.38
COL6A1-202ENST00000463060 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
COL6A1-202ENST00000463060 AK9Q5TCS8 1911 aa17.39■□□□□ 0.37
COL6A1-202ENST00000463060 CDC45O75419 566 aa17.39■□□□□ 0.37
COL6A1-202ENST00000463060 GTF2IP78347 998 aa17.39■□□□□ 0.37
COL6A1-202ENST00000463060 CHAF1AQ13111 956 aaPredicted RBP17.39■□□□□ 0.37
COL6A1-202ENST00000463060 STRIP1Q5VSL9 837 aa17.39■□□□□ 0.37
COL6A1-202ENST00000463060 ZNRF3Q9ULT6 936 aa17.39■□□□□ 0.37
COL6A1-202ENST00000463060 SBF1O95248 1867 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 G3V3G9 751 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 FKBP1AP62942 108 aaKnown RBP17.38■□□□□ 0.37
COL6A1-202ENST00000463060 GRIK5Q16478 980 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 DACT2Q5SW24 774 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 DCAF8Q5TAQ9 597 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 TTLL5Q6EMB2 1281 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 CERS5Q8N5B7 392 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 ZNF384Q8TF68 577 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 TBC1D22AQ8WUA7 517 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 FSD1Q9BTV5 496 aa17.38■□□□□ 0.37
COL6A1-202ENST00000463060 PSME4Q14997 1843 aa17.37■□□□□ 0.37
COL6A1-202ENST00000463060 TCRBV5S4A2TA0A5A2 114 aa17.37■□□□□ 0.37
COL6A1-202ENST00000463060 USP17L3A6NCW0 530 aa17.37■□□□□ 0.37
COL6A1-202ENST00000463060 USP17L4A6NCW7 530 aa17.37■□□□□ 0.37
COL6A1-202ENST00000463060 CHGBP05060 677 aa17.37■□□□□ 0.37
COL6A1-202ENST00000463060 ADD2P35612 726 aa17.37■□□□□ 0.37
COL6A1-202ENST00000463060 USP17L1Q7RTZ2 530 aa17.37■□□□□ 0.37
COL6A1-202ENST00000463060 JAG2Q9Y219 1238 aa17.37■□□□□ 0.37
COL6A1-202ENST00000463060 CCDC88AQ3V6T2 1871 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 FZD9O00144 591 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 HIP1O00291 1037 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 RNF113AO15541 343 aaKnown RBP17.36■□□□□ 0.37
COL6A1-202ENST00000463060 ZFYP08048 801 aaPredicted RBP17.36■□□□□ 0.37
COL6A1-202ENST00000463060 VIL1P09327 827 aaKnown RBP17.36■□□□□ 0.37
COL6A1-202ENST00000463060 LMNB1P20700 586 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 PRDX5P30044 214 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 UBE3CQ15386 1083 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 SLFNL1Q499Z3 407 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 NIM1KQ8IY84 436 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 ABCF2Q9UG63 623 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 SUGT1Q9Y2Z0 365 aa17.36■□□□□ 0.37
COL6A1-202ENST00000463060 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
COL6A1-202ENST00000463060 PDE6AP16499 860 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 CXCL9Q07325 125 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 MAP3K12Q12852 859 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 MFSD14BQ5SR56 506 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 SLC9C2Q5TAH2 1124 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 SPTY2D1Q68D10 685 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-202ENST00000463060 TMED8Q6PL24 325 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-202ENST00000463060 ZGPATQ8N5A5 531 aaKnown RBP17.35■□□□□ 0.37
COL6A1-202ENST00000463060 NSUN4Q96CB9 384 aaKnown RBP17.35■□□□□ 0.37
COL6A1-202ENST00000463060 GMLQ99445 158 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 BACH2Q9BYV9 841 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 LRP2BPQ9P2M1 347 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 MYH7P12883 1935 aa17.35■□□□□ 0.37
COL6A1-202ENST00000463060 DICER1Q9UPY3 1922 aaKnown RBP17.35■□□□□ 0.37
COL6A1-202ENST00000463060 GRIN3BO60391 1043 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 MECOMQ03112 1051 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 NMIQ13287 307 aaPredicted RBP17.34■□□□□ 0.37
COL6A1-202ENST00000463060 GPR162Q16538 588 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 LRRFIP1Q32MZ4 808 aaKnown RBP17.34■□□□□ 0.37
COL6A1-202ENST00000463060 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
COL6A1-202ENST00000463060 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 FAM227BQ96M60 508 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 MXD3Q9BW11 206 aa17.34■□□□□ 0.37
COL6A1-202ENST00000463060 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms