RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 RSBN1LQ6PCB5 846 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-206ENST00000462613 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 PNMA8AQ86V59 439 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-206ENST00000462613 TXNRD3Q86VQ6 643 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 SIRT2Q8IXJ6 389 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 TDRD7Q8NHU6 1098 aaKnown RBP7.81□□□□□ -1.16
SF3B1-206ENST00000462613 DPF2Q92785 391 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 L3MBTL3Q96JM7 780 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-206ENST00000462613 FAM84BQ96KN1 310 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-206ENST00000462613 IL1RAPL2Q9NP60 686 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 HACL1Q9UJ83 578 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 PCDHB15Q9Y5E8 787 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 COL4A5P29400 1685 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 MYO5AQ9Y4I1 1855 aaKnown RBP7.81□□□□□ -1.16
SF3B1-206ENST00000462613 MAST2Q6P0Q8 1798 aa7.8□□□□□ -1.16
SF3B1-206ENST00000462613 VIL1P09327 827 aaKnown RBP7.8□□□□□ -1.16
SF3B1-206ENST00000462613 USP17L8P0C7I0 530 aa7.8□□□□□ -1.16
SF3B1-206ENST00000462613 GMPSP49915 693 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-206ENST00000462613 MFSD14BQ5SR56 506 aa7.8□□□□□ -1.16
SF3B1-206ENST00000462613 ERICH6BQ5W0A0 696 aa7.8□□□□□ -1.16
SF3B1-206ENST00000462613 SPTY2D1Q68D10 685 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-206ENST00000462613 CCDC102BQ68D86 513 aa7.8□□□□□ -1.16
SF3B1-206ENST00000462613 SLF2Q8IX21 1173 aa7.8□□□□□ -1.16
SF3B1-206ENST00000462613 ZNF784Q8NCA9 323 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-206ENST00000462613 IQSEC3Q9UPP2 1182 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-206ENST00000462613 SUGT1Q9Y2Z0 365 aa7.8□□□□□ -1.16
SF3B1-206ENST00000462613 PDS5AQ29RF7 1337 aaKnown RBP7.79□□□□□ -1.16
SF3B1-206ENST00000462613 FAM205AQ6ZU69 1335 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 WTIPA6NIX2 430 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-206ENST00000462613 ERC2O15083 957 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 MYO1BO43795 1136 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 IGSF3O75054 1194 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 ADORA1P30542 326 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 EPHX2P34913 555 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 PHKA1P46020 1223 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 DACT2Q5SW24 774 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 ANKRD45Q5TZF3 282 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 MICALL2Q8IY33 904 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 EAF2Q96CJ1 260 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-206ENST00000462613 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 CCDC8Q9H0W5 538 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-206ENST00000462613 RRAGCQ9HB90 399 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 ADARB2Q9NS39 739 aaKnown RBP7.79□□□□□ -1.16
SF3B1-206ENST00000462613 GPRC5DQ9NZD1 345 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 CNOT7Q9UIV1 285 aaKnown RBP7.79□□□□□ -1.16
SF3B1-206ENST00000462613 DOCK2Q92608 1830 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 TRPM7Q96QT4 1865 aa7.79□□□□□ -1.16
SF3B1-206ENST00000462613 IRS2Q9Y4H2 1338 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 ZBTB22O15209 634 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 LDHBP07195 334 aaKnown RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 ARID4AP29374 1257 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 SCNN1DP51172 638 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 RBM5P52756 815 aaKnown RBP eCLIP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 TTF1Q15361 905 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 EAPPQ56P03 285 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 USP50Q70EL3 339 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 ERICH6Q7L0X2 663 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 DZIP1Q86YF9 867 aaKnown RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 KIAA0825Q8IV33 1275 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 SPATA5Q8NB90 893 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 ZNF512BQ96KM6 892 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 DBNDD2Q9BQY9 259 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 NOL10Q9BSC4 688 aaKnown RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 NMRK2Q9NPI5 230 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 ABCF2Q9UG63 623 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 DBNLQ9UJU6 430 aaKnown RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 TTF2Q9UNY4 1162 aaKnown RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 CLEC11AQ9Y240 323 aa7.78□□□□□ -1.16
SF3B1-206ENST00000462613 ZBTB12Q9Y330 459 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-206ENST00000462613 F8W031 263 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-206ENST00000462613 SMARCA5O60264 1052 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-206ENST00000462613 TOMM70O94826 608 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 LDHCP07864 332 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 GSTO1P78417 241 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 HDLBPQ00341 1268 aaKnown RBP7.77□□□□□ -1.17
SF3B1-206ENST00000462613 RASGRF1Q13972 1273 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 DLGAP5Q15398 846 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 KIF4BQ2VIQ3 1234 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 LRRFIP1Q32MZ4 808 aaKnown RBP7.77□□□□□ -1.17
SF3B1-206ENST00000462613 B4GALNT3Q6L9W6 998 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 LDHDQ86WU2 507 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 SMC5Q8IY18 1101 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.77□□□□□ -1.17
SF3B1-206ENST00000462613 TEKT1Q969V4 418 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 TAF1DQ9H5J8 278 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-206ENST00000462613 KCNQ5Q9NR82 932 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 ECHDC1Q9NTX5 307 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 TMOD2Q9NZR1 351 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 LRP2BPQ9P2M1 347 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 JAG2Q9Y219 1238 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 TTC41PQ6P2S7 1318 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 SALL1Q9NSC2 1324 aa7.77□□□□□ -1.17
SF3B1-206ENST00000462613 MX1P20591 662 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 EPS15P42566 896 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 MCAMP43121 646 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 MAP3K12Q12852 859 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 RBM26Q5T8P6 1007 aaKnown RBP7.76□□□□□ -1.17
SF3B1-206ENST00000462613 TMED8Q6PL24 325 aaPredicted RBP7.76□□□□□ -1.17
SF3B1-206ENST00000462613 CENPQQ7L2Z9 268 aaPredicted RBP7.76□□□□□ -1.17
SF3B1-206ENST00000462613 CHD1LQ86WJ1 897 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms