RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ERCC6LQ2NKX8 1250 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 ZMYM1Q5SVZ6 1142 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 ATG9AQ7Z3C6 839 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 ZNF594Q96JF6 807 aaPredicted RBP13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 OSBPL5Q9H0X9 879 aaPredicted RBP13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 KIAA1468Q9P260 1216 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 ADALQ6DHV7 355 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
PDZRN3-203ENST00000462146 STK38Q15208 465 aa13.66□□□□□ -0.22
PDZRN3-203ENST00000462146 LRRC24Q50LG9 513 aa13.66□□□□□ -0.22
PDZRN3-203ENST00000462146 NAT10Q9H0A0 1025 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-203ENST00000462146 HELLSQ9NRZ9 838 aa13.66□□□□□ -0.22
PDZRN3-203ENST00000462146 RTEL1Q9NZ71 1219 aa13.66□□□□□ -0.22
PDZRN3-203ENST00000462146 TERF2Q15554 542 aa13.66□□□□□ -0.22
PDZRN3-203ENST00000462146 MROH7-TTC4A0A0A0MT08 1334 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 GSDMDP57764 484 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 FOXO4P98177 505 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 SF3A1Q15459 793 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 GOLGA8FQ08AF8 430 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 GOLGA8DPQ0D2H9 430 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 NCAPHQ15003 741 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 ZNF274Q96GC6 653 aaPredicted RBP13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 FAM53CQ9NYF3 392 aa13.65□□□□□ -0.22
PDZRN3-203ENST00000462146 PHKG2P15735 406 aa13.64□□□□□ -0.23
PDZRN3-203ENST00000462146 ATL3Q6DD88 541 aa13.64□□□□□ -0.23
PDZRN3-203ENST00000462146 KCND1Q9NSA2 647 aa13.64□□□□□ -0.23
PDZRN3-203ENST00000462146 MEGF6O75095 1541 aa13.64□□□□□ -0.23
PDZRN3-203ENST00000462146 FOXP2O15409 715 aa13.64□□□□□ -0.23
PDZRN3-203ENST00000462146 C8orf76Q96K31 380 aa13.64□□□□□ -0.23
PDZRN3-203ENST00000462146 NLRP2Q9NX02 1062 aa13.64□□□□□ -0.23
PDZRN3-203ENST00000462146 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 SPTLC2O15270 562 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 ZNF202O95125 648 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 IFIT1P09914 478 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 SFPQP23246 707 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 TJP1Q07157 1748 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 DPF2Q92785 391 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 HSD3B7Q9H2F3 369 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 IMPACTQ9P2X3 320 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 C4BP0C0L5 1744 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 A0A1W2PQ27 194 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 A0A1W2PQ64 194 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 A0A1W2PQD8 194 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 FANCGO15287 622 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 SLC3A2P08195 630 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 MARCKSP29966 332 aaPredicted RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 MYSM1Q5VVJ2 828 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 AIFM3Q96NN9 605 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 PUS3Q9BZE2 481 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 L2HGDHQ9H9P8 463 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 KLF18A0A0U1RQI7 1052 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 WDHD1O75717 1129 aaPredicted RBP13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 PFKFB1P16118 471 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 NKX2-3Q8TAU0 364 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 DENND2AQ9ULE3 1009 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 HPS5Q9UPZ3 1129 aa13.63□□□□□ -0.23
PDZRN3-203ENST00000462146 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 ERICH4A6NGS2 130 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 GOLGA8BA8MQT2 603 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 NLRP12P59046 1061 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 ECM29Q5VYK3 1845 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 A0A1B0GUL7 405 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 CLCN6P51797 869 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 AXDND1Q5T1B0 1012 aaPredicted RBP13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 CCDC150Q8NCX0 1101 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 GLI3P10071 1580 aa13.62□□□□□ -0.23
PDZRN3-203ENST00000462146 H2AFXP16104 143 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 ANTXR2P58335 489 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 FANCCQ00597 558 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 TTLL7Q6ZT98 887 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 FBXO18Q8NFZ0 1043 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 BPIFA3Q9BQP9 254 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 POLR3EQ9NVU0 708 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 ZBTB22O15209 634 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 PRC1O43663 620 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 ANKLE2Q86XL3 938 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 KCNG4Q8TDN1 519 aa13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDZRN3-203ENST00000462146 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 HOMER1Q86YM7 354 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 DNAI1Q9UI46 699 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms