RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
SF3A3-202ENST00000460925 ADGRB1O14514 1584 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 NPHP4O75161 1426 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-202ENST00000460925 PLEKHG1Q9ULL1 1385 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 CPNE3O75131 537 aaKnown RBP6.85□□□□□ -1.31
SF3A3-202ENST00000460925 TNFRSF21O75509 655 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 EGFRP00533 1210 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 CENPBP07199 599 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-202ENST00000460925 ZC3H6P61129 1189 aaKnown RBP6.85□□□□□ -1.31
SF3A3-202ENST00000460925 HDLBPQ00341 1268 aaKnown RBP6.85□□□□□ -1.31
SF3A3-202ENST00000460925 SCARF1Q14162 830 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 CTC1Q2NKJ3 1217 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 SAMD5Q5TGI4 173 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 TMEM132EQ6IEE7 984 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 DHX37Q8IY37 1157 aaKnown RBP6.85□□□□□ -1.31
SF3A3-202ENST00000460925 NEUROD4Q9HD90 331 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 KCNMB2Q9Y691 235 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 AK5Q9Y6K8 562 aa6.85□□□□□ -1.31
SF3A3-202ENST00000460925 CHD2O14647 1828 aaKnown RBP6.85□□□□□ -1.31
SF3A3-202ENST00000460925 PTPRUQ92729 1446 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 XRN1Q8IZH2 1706 aaKnown RBP6.84□□□□□ -1.31
SF3A3-202ENST00000460925 ROCK2O75116 1388 aaKnown RBP6.84□□□□□ -1.31
SF3A3-202ENST00000460925 METP08581 1390 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 RPGRIP1LQ68CZ1 1315 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 DIP2AQ14689 1571 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 A0A1W2PNR3 127 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 GIPC1O14908 333 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 EPB42P16452 691 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 TYRO3Q06418 890 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 TRIP4Q15650 581 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-202ENST00000460925 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-202ENST00000460925 C6orf118Q5T5N4 469 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 NLRP8Q86W28 1048 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 SNX29Q8TEQ0 813 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 HIRIP3Q9BW71 556 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-202ENST00000460925 PDZRN3Q9UPQ7 1066 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 DYRK1BQ9Y463 629 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 EID1Q9Y6B2 187 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 KNDC1Q76NI1 1749 aa6.84□□□□□ -1.31
SF3A3-202ENST00000460925 QRICH2Q9H0J4 1663 aa6.84□□□□□ -1.32
SF3A3-202ENST00000460925 A6NHS1 94 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 GRNP28799 593 aaKnown RBP6.83□□□□□ -1.32
SF3A3-202ENST00000460925 LRRC69Q6ZNQ3 347 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 METTL16Q86W50 562 aaKnown RBP6.83□□□□□ -1.32
SF3A3-202ENST00000460925 ANKLE2Q86XL3 938 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 CRIPAKQ8N1N5 446 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 TMEM87AQ8NBN3 555 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 ZFYVE28Q9HCC9 887 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 VTI1BQ9UEU0 232 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 SPG7Q9UQ90 795 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 MED14O60244 1454 aa6.83□□□□□ -1.32
SF3A3-202ENST00000460925 UBAP1LF5GYI3 381 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 F11P03951 625 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 RHOQP17081 205 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 KCNQ4P56696 695 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 FANCCQ00597 558 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
SF3A3-202ENST00000460925 TRIM46Q7Z4K8 759 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 ZNF438Q7Z4V0 828 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.82□□□□□ -1.32
SF3A3-202ENST00000460925 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 ELP3Q9H9T3 547 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 STK26Q9P289 416 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 XIRP1Q702N8 1843 aaKnown RBP6.82□□□□□ -1.32
SF3A3-202ENST00000460925 NWD1Q149M9 1564 aa6.82□□□□□ -1.32
SF3A3-202ENST00000460925 NALCNQ8IZF0 1738 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 CPS1P31327 1500 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 FAM187AA6NFU0 413 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 DGAT1O75907 488 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 ERCC5P28715 1186 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-202ENST00000460925 ZEB1P37275 1124 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-202ENST00000460925 RAD51AP2Q09MP3 1159 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 SAFB2Q14151 953 aaKnown RBP eCLIP6.81□□□□□ -1.32
SF3A3-202ENST00000460925 CMTR1Q8N1G2 835 aaKnown RBP6.81□□□□□ -1.32
SF3A3-202ENST00000460925 CCDC74AQ96AQ1 378 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 CARD11Q9BXL7 1154 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 C14orf93Q9H972 538 aaKnown RBP6.81□□□□□ -1.32
SF3A3-202ENST00000460925 FOXD3Q9UJU5 478 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-202ENST00000460925 TRAK1Q9UPV9 953 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 YTHDC2Q9H6S0 1430 aaKnown RBP6.81□□□□□ -1.32
SF3A3-202ENST00000460925 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-202ENST00000460925 GPRASP1Q5JY77 1395 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 USP47Q96K76 1375 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 PLEKHH1Q9ULM0 1364 aa6.81□□□□□ -1.32
SF3A3-202ENST00000460925 XYLBO75191 536 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 CTSHP09668 335 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 EIF4BP23588 611 aaKnown RBP6.8□□□□□ -1.32
SF3A3-202ENST00000460925 USPL1Q5W0Q7 1092 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 RNF34Q969K3 372 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 PMEPA1Q969W9 287 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 CEP63Q96MT8 703 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 SRCIN1Q9C0H9 1055 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 C12orf49Q9H741 205 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 TMEM63CQ9P1W3 806 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 USP20Q9Y2K6 914 aa6.8□□□□□ -1.32
SF3A3-202ENST00000460925 ZNF335Q9H4Z2 1342 aaPredicted RBP6.79□□□□□ -1.32
SF3A3-202ENST00000460925 POTECB2RU33 542 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 PHACTR2O75167 634 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 HSPA5P11021 654 aaKnown RBP6.79□□□□□ -1.32
SF3A3-202ENST00000460925 BMP1P13497 986 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms