RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 CDCP2Q5VXM1 449 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 CDPF1Q6NVV7 123 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 OGFOD3Q6PK18 319 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 HHIPL2Q6UWX4 724 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 WFDC3Q8IUB2 231 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 ZFPM1Q8IX07 1006 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 SP8Q8IXZ3 490 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 PLD6Q8N2A8 252 aaKnown RBP1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 BAHD1Q8TBE0 780 aaPredicted RBP1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 C7orf43Q8WVR3 580 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 WNT8BQ93098 351 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 IFT43Q96FT9 208 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 KLHDC7BQ96G42 594 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 TEPSINQ96N21 525 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 C11orf16Q9NQ32 467 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 PRDM7Q9NQW5 492 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 ZFATQ9P243 1243 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 CTNND2Q9UQB3 1225 aa1.32□□□□□ -2.2
SNORD42B-201ENST00000458893 ZC3H12DA2A288 527 aaKnown RBP1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 MATN3O15232 486 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 ADAM11O75078 769 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 C6P13671 934 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 RAC2P15153 192 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 RAB6AP20340 208 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 PIP4K2BP78356 416 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 MAP7D1Q3KQU3 841 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 TSGA10IPQ3SY00 556 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 XKR5Q6UX68 686 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 SMG8Q8ND04 991 aaKnown RBP1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 FEZF2Q8TBJ5 459 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 ASB11Q8WXH4 323 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 SLC7A3Q8WY07 619 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 EZH1Q92800 747 aaPredicted RBP1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 CCDC120Q96HB5 630 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 SCAND2PQ9GZW5 306 aaPredicted RBP1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 OSGEPQ9NPF4 335 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 C11orf21Q9P2W6 132 aa1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 CNOT11Q9UKZ1 510 aaKnown RBP1.31□□□□□ -2.2
SNORD42B-201ENST00000458893 H3BRJ5 948 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 TGFBR3LH3BV60 316 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 ONECUT2O95948 504 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 NFICP08651 508 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 SRFP11831 508 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 DRD2P14416 443 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 PTPRAP18433 802 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 SOX18P35713 384 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 EIF4G2P78344 907 aaKnown RBP eCLIP1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 HNRNPA0Q13151 305 aaKnown RBP1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 SKIV2LQ15477 1246 aaKnown RBP1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 EXOSC6Q5RKV6 272 aaKnown RBP1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 SH3PXD2AQ5TCZ1 1133 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 IER5Q5VY09 327 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 BHLHA9Q7RTU4 235 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 ALDH16A1Q8IZ83 802 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 GATA6Q92908 595 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 NGLY1Q96IV0 654 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 TRIM34Q9BYJ4 488 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 SUGCTQ9HAC7 445 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 KCNK12Q9HB15 430 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 SEMA3GQ9NS98 782 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 KCTD3Q9Y597 815 aa1.3□□□□□ -2.2
SNORD42B-201ENST00000458893 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 LOC100289279A0A1B0GTE1 492 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 FZD7O75084 574 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 PPFIA2O75334 1257 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 TIAF1O95411 115 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 SLPIP03973 132 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 CEACAM5P06731 702 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 TACR2P21452 398 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 MAGEA10P43363 369 aaPredicted RBP1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 IDH3AP50213 366 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 ARSDP51689 593 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 HIRAP54198 1017 aaPredicted RBP1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 DLG4P78352 724 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 SOX4Q06945 474 aaPredicted RBP1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 C19orf57Q0VDD7 668 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 SMN1Q16637 294 aaKnown RBP1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 BARGINQ6ZT62 677 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 FRMD5Q7Z6J6 570 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 ZNF575Q86XF7 245 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 TNS4Q8IZW8 715 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 FAM181AQ8N9Y4 354 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 ABHD4Q8TB40 342 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 USP26Q9BXU7 913 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 TMPRSS13Q9BYE2 586 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 ADAM7Q9H2U9 754 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 MKNK2Q9HBH9 465 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 SH2B1Q9NRF2 756 aaPredicted RBP1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 ZNF358Q9NW07 568 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 TNFRSF18Q9Y5U5 241 aa1.29□□□□□ -2.2
SNORD42B-201ENST00000458893 PPP1R12BO60237 982 aaPredicted RBP1.28□□□□□ -2.2
SNORD42B-201ENST00000458893 XYLBO75191 536 aa1.28□□□□□ -2.2
SNORD42B-201ENST00000458893 SEMA7AO75326 666 aa1.28□□□□□ -2.2
SNORD42B-201ENST00000458893 AMHP03971 560 aa1.28□□□□□ -2.2
SNORD42B-201ENST00000458893 EPHA1P21709 976 aa1.28□□□□□ -2.2
SNORD42B-201ENST00000458893 SCNN1AP37088 669 aa1.28□□□□□ -2.2
SNORD42B-201ENST00000458893 GDNFP39905 211 aa1.28□□□□□ -2.2
SNORD42B-201ENST00000458893 AFF3P51826 1226 aaKnown RBP1.28□□□□□ -2.2
SNORD42B-201ENST00000458893 KRTAP10-7P60409 375 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms