RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TMEM259Q4ZIN3 620 aa7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 HSP90AB2PQ58FF8 381 aa7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 MORN1Q5T089 497 aa7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 TBC1D9BQ66K14 1250 aa7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 SPG7Q9UQ90 795 aa7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 PCDHB3Q9Y5E6 796 aa7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 POLR2AP24928 1970 aaKnown RBP7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 CHD6Q8TD26 2715 aa7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 CYP19A1P11511 503 aaPredicted RBP7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 NDUFV2P19404 249 aa7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 GMPSP49915 693 aaPredicted RBP7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 CXCL9Q07325 125 aa7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 PROCA1Q8NCQ7 364 aaPredicted RBP7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 SHISA4Q96DD7 197 aa7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 GDF15Q99988 308 aa7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 ZBTB3Q9H5J0 574 aa7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 LIMD1Q9UGP4 676 aa7.57□□□□□ -1.2
SBDSP1-204ENST00000453858 SHTN1A0MZ66 631 aa7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 LILRB3O75022 631 aa7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 KCNC4Q03721 635 aa7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 FLIIQ13045 1269 aa7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 FAM109BQ6ICB4 259 aaPredicted RBP7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 ALYREFQ86V81 257 aaKnown RBP7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 NR2E3Q9Y5X4 410 aa7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 A0A1W2PP64 1363 aa7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 RTL1A6NKG5 1358 aa7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 TONSLQ96HA7 1378 aa7.56□□□□□ -1.2
SBDSP1-204ENST00000453858 MRC1P22897 1456 aa7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 NPR1P16066 1061 aa7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 MTMR2Q13614 643 aa7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 RRS1Q15050 365 aaKnown RBP7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 KRT26Q7Z3Y9 468 aa7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 DNAJC10Q8IXB1 793 aa7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 BANK1Q8NDB2 785 aa7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 IRX2Q9BZI1 471 aaPredicted RBP7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 ANKRD11Q6UB99 2663 aaPredicted RBP7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 TJP1Q07157 1748 aa7.55□□□□□ -1.2
SBDSP1-204ENST00000453858 EDC4Q6P2E9 1401 aaKnown RBP7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 ZDBF2Q9HCK1 2354 aa7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 ADM5C9JUS6 153 aa7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 P2RX7Q99572 595 aaKnown RBP7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 PCDHB15Q9Y5E8 787 aa7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 CHD9Q3L8U1 2897 aa7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 COL15A1P39059 1388 aa7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 NPC1L1Q9UHC9 1359 aa7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 KMT2BQ9UMN6 2715 aaPredicted RBP7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 SETXQ7Z333 2677 aaKnown RBP7.54□□□□□ -1.2
SBDSP1-204ENST00000453858 CACNA1BQ00975 2339 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 CDHR2Q9BYE9 1310 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 FMNL1O95466 1100 aaPredicted RBP7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 EGFRP00533 1210 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 EIF5P55010 431 aaKnown RBP7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 SLC4A8Q2Y0W8 1093 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 SCUBE3Q8IX30 993 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 SLC12A5Q9H2X9 1139 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 CNOT7Q9UIV1 285 aaKnown RBP7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 PCDHGC3Q9UN70 934 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 ZBTB1Q9Y2K1 713 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 SLC27A5Q9Y2P5 690 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 TRIOO75962 3097 aa7.53□□□□□ -1.2
SBDSP1-204ENST00000453858 ANKRD26Q9UPS8 1709 aa7.52□□□□□ -1.2
SBDSP1-204ENST00000453858 C6orf229H3BNL8 230 aa7.52□□□□□ -1.21
SBDSP1-204ENST00000453858 RFC5P40937 340 aa7.52□□□□□ -1.21
SBDSP1-204ENST00000453858 PUS10Q3MIT2 529 aaKnown RBP7.52□□□□□ -1.21
SBDSP1-204ENST00000453858 SLC51AQ86UW1 340 aa7.52□□□□□ -1.21
SBDSP1-204ENST00000453858 RETREG3Q86VR2 466 aa7.52□□□□□ -1.21
SBDSP1-204ENST00000453858 LARGE2Q8N3Y3 721 aa7.52□□□□□ -1.21
SBDSP1-204ENST00000453858 EFCC1Q9HA90 598 aa7.52□□□□□ -1.21
SBDSP1-204ENST00000453858 ZNF609O15014 1411 aa7.52□□□□□ -1.21
SBDSP1-204ENST00000453858 FKBP1BP68106 108 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 TJAP1Q5JTD0 557 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 BRICD5Q6PL45 260 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 MOB2Q70IA6 237 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 NBPF11Q86T75 865 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 CNBD1Q8NA66 436 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 NFATC2IPQ8NCF5 419 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 CD99L2Q8TCZ2 262 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 ZNRF3Q9ULT6 936 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 ATRXP46100 2492 aa7.51□□□□□ -1.21
SBDSP1-204ENST00000453858 DMDP11532 3685 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 APBB1O00213 710 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 GUCA2AQ02747 115 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 QPCTQ16769 361 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 CC2D2BQ6DHV5 1058 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 DESI1Q6ICB0 168 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 BLOC1S3Q6QNY0 202 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 HELBQ8NG08 1087 aaPredicted RBP7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 MAFAQ8NHW3 353 aaPredicted RBP7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 CDCA5Q96FF9 252 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 ERO1AQ96HE7 468 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 USB1Q9BQ65 265 aaKnown RBP7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 HTATIP2Q9BUP3 242 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 IL21Q9HBE4 155 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 PTCH2Q9Y6C5 1203 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 KDM3BQ7LBC6 1761 aa7.5□□□□□ -1.21
SBDSP1-204ENST00000453858 MYO15AQ9UKN7 3530 aa7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 ALDH1B1P30837 517 aa7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 CABP4P57796 275 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms