RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 FAM205AQ6ZU69 1335 aa17.89■□□□□ 0.45
TRAPPC12-211ENST00000452495 MYO5AQ9Y4I1 1855 aaKnown RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 PSMD14O00487 310 aa17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 VIL1P09327 827 aaKnown RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 IFIT2P09913 472 aaKnown RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 RPS12P25398 132 aaKnown RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 YY1P25490 414 aa17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 FKBP1AP62942 108 aaKnown RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 CCDC158Q5M9N0 1113 aa17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 L3MBTL3Q96JM7 780 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 TLR7Q9NYK1 1049 aaKnown RBP17.88■□□□□ 0.45
TRAPPC12-211ENST00000452495 GTF2IP78347 998 aa17.87■□□□□ 0.45
TRAPPC12-211ENST00000452495 DACT2Q5SW24 774 aa17.87■□□□□ 0.45
TRAPPC12-211ENST00000452495 TTLL5Q6EMB2 1281 aa17.87■□□□□ 0.45
TRAPPC12-211ENST00000452495 ZNF512BQ96KM6 892 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC12-211ENST00000452495 CCDC8Q9H0W5 538 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC12-211ENST00000452495 DENND2AQ9ULE3 1009 aa17.87■□□□□ 0.45
TRAPPC12-211ENST00000452495 GJA3Q9Y6H8 435 aa17.87■□□□□ 0.45
TRAPPC12-211ENST00000452495 SMARCA5O60264 1052 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 DDNO94850 711 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 RASGRF1Q13972 1273 aa17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 TTC39AQ5SRH9 613 aa17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 RSBN1LQ6PCB5 846 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 AGBL3Q8NEM8 1001 aa17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 TBC1D22AQ8WUA7 517 aa17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 FBXW7Q969H0 707 aa17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 KCNQ5Q9NR82 932 aa17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 AK9Q5TCS8 1911 aa17.86■□□□□ 0.45
TRAPPC12-211ENST00000452495 ANKRD45Q5TZF3 282 aa17.85■□□□□ 0.45
TRAPPC12-211ENST00000452495 ADAMTSL1Q8N6G6 1762 aa17.85■□□□□ 0.45
TRAPPC12-211ENST00000452495 GPATCH3Q96I76 525 aa17.85■□□□□ 0.45
TRAPPC12-211ENST00000452495 MYH2Q9UKX2 1941 aa17.85■□□□□ 0.45
TRAPPC12-211ENST00000452495 IQSEC3Q9UPP2 1182 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC12-211ENST00000452495 SALL1Q9NSC2 1324 aa17.84■□□□□ 0.45
TRAPPC12-211ENST00000452495 IQCA1LA6NCM1 817 aa17.84■□□□□ 0.45
TRAPPC12-211ENST00000452495 GMPSP49915 693 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC12-211ENST00000452495 WDR66Q8TBY9 1149 aa17.84■□□□□ 0.45
TRAPPC12-211ENST00000452495 DPF2Q92785 391 aa17.84■□□□□ 0.45
TRAPPC12-211ENST00000452495 LMOD1P29536 600 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 MMP14P50281 582 aa17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 SCNN1DP51172 638 aa17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 NUCB1Q02818 461 aa17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 CHAF1AQ13111 956 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 MFSD14BQ5SR56 506 aa17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 CENPQQ7L2Z9 268 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 ZGPATQ8N5A5 531 aaKnown RBP17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRAPPC12-211ENST00000452495 MCAMP43121 646 aa17.82■□□□□ 0.44
TRAPPC12-211ENST00000452495 CHD1LQ86WJ1 897 aa17.82■□□□□ 0.44
TRAPPC12-211ENST00000452495 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
TRAPPC12-211ENST00000452495 CCDC136Q96JN2 1154 aa17.82■□□□□ 0.44
TRAPPC12-211ENST00000452495 GMLQ99445 158 aa17.82■□□□□ 0.44
TRAPPC12-211ENST00000452495 GPRC5DQ9NZD1 345 aa17.82■□□□□ 0.44
TRAPPC12-211ENST00000452495 HMG20BQ9P0W2 317 aa17.82■□□□□ 0.44
TRAPPC12-211ENST00000452495 SUGT1Q9Y2Z0 365 aa17.82■□□□□ 0.44
TRAPPC12-211ENST00000452495 MAST3O60307 1309 aa17.81■□□□□ 0.44
TRAPPC12-211ENST00000452495 TTC41PQ6P2S7 1318 aa17.81■□□□□ 0.44
TRAPPC12-211ENST00000452495 B4GALNT3Q6L9W6 998 aa17.81■□□□□ 0.44
TRAPPC12-211ENST00000452495 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
TRAPPC12-211ENST00000452495 GPBP1L1Q9HC44 474 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC12-211ENST00000452495 ECHDC1Q9NTX5 307 aa17.81■□□□□ 0.44
TRAPPC12-211ENST00000452495 JAG2Q9Y219 1238 aa17.81■□□□□ 0.44
TRAPPC12-211ENST00000452495 ZBTB12Q9Y330 459 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC12-211ENST00000452495 SALL3Q9BXA9 1300 aa17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 ATP5JP18859 108 aa17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 MX1P20591 662 aa17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 SCARF1Q14162 830 aa17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 CERS5Q8N5B7 392 aa17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 ZNF526Q8TF50 670 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 LNPKQ9C0E8 428 aa17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 PPP4R2Q9NY27 417 aa17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 HACL1Q9UJ83 578 aa17.8■□□□□ 0.44
TRAPPC12-211ENST00000452495 IGSF3O75054 1194 aa17.79■□□□□ 0.44
TRAPPC12-211ENST00000452495 USP17L8P0C7I0 530 aa17.79■□□□□ 0.44
TRAPPC12-211ENST00000452495 VEGFAP15692 232 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC12-211ENST00000452495 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC12-211ENST00000452495 MICALL2Q8IY33 904 aa17.79■□□□□ 0.44
TRAPPC12-211ENST00000452495 MXD3Q9BW11 206 aa17.79■□□□□ 0.44
TRAPPC12-211ENST00000452495 HDAC9Q9UKV0 1011 aa17.79■□□□□ 0.44
TRAPPC12-211ENST00000452495 AOX1Q06278 1338 aa17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 H7C1D1 291 aa17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 ERC2O15083 957 aa17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 SPTY2D1Q68D10 685 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 PI16Q6UXB8 463 aa17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 KIAA0825Q8IV33 1275 aa17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 OGFOD1Q8N543 542 aa17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 ZNF784Q8NCA9 323 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 NMRK2Q9NPI5 230 aa17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 CNOT7Q9UIV1 285 aaKnown RBP17.78■□□□□ 0.44
TRAPPC12-211ENST00000452495 POTECB2RU33 542 aa17.77■□□□□ 0.44
TRAPPC12-211ENST00000452495 TAF1DQ9H5J8 278 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC12-211ENST00000452495 GLRX3O76003 335 aaKnown RBP17.76■□□□□ 0.43
TRAPPC12-211ENST00000452495 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
TRAPPC12-211ENST00000452495 KCNA4P22459 653 aa17.76■□□□□ 0.43
TRAPPC12-211ENST00000452495 EPHX2P34913 555 aa17.76■□□□□ 0.43
TRAPPC12-211ENST00000452495 EPS15P42566 896 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms