RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 MPNDQ8N594 471 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 BSDC1Q9NW68 430 aaPredicted RBP12.85□□□□□ -0.35
PKP4-206ENST00000452162 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
PKP4-206ENST00000452162 DUOX1Q9NRD9 1551 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 DPP8Q6V1X1 898 aaPredicted RBP12.84□□□□□ -0.35
PKP4-206ENST00000452162 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
PKP4-206ENST00000452162 MAP4K1Q92918 833 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 PSMD1Q99460 953 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 ZNF609O15014 1411 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 CIAO1O76071 339 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 YY1P25490 414 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 IL15P40933 162 aaPredicted RBP12.84□□□□□ -0.35
PKP4-206ENST00000452162 SKOR2Q2VWA4 1001 aaPredicted RBP12.84□□□□□ -0.35
PKP4-206ENST00000452162 EDC3Q96F86 508 aaKnown RBP12.84□□□□□ -0.35
PKP4-206ENST00000452162 MPHOSPH8Q99549 860 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 HAUS7Q99871 368 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 MINPP1Q9UNW1 487 aa12.84□□□□□ -0.35
PKP4-206ENST00000452162 TIAM2Q8IVF5 1701 aa12.83□□□□□ -0.36
PKP4-206ENST00000452162 FSD2A1L4K1 749 aa12.83□□□□□ -0.36
PKP4-206ENST00000452162 EYA2O00167 538 aa12.83□□□□□ -0.36
PKP4-206ENST00000452162 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
PKP4-206ENST00000452162 GZF1Q9H116 711 aaPredicted RBP12.83□□□□□ -0.36
PKP4-206ENST00000452162 RBM8AQ9Y5S9 174 aaKnown RBP12.83□□□□□ -0.36
PKP4-206ENST00000452162 A0A1B0GUL6 1792 aa12.83□□□□□ -0.36
PKP4-206ENST00000452162 WTIPA6NIX2 430 aaPredicted RBP12.83□□□□□ -0.36
PKP4-206ENST00000452162 GOLGA6L22H0YM25 854 aa12.83□□□□□ -0.36
PKP4-206ENST00000452162 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
PKP4-206ENST00000452162 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
PKP4-206ENST00000452162 POLLQ9UGP5 575 aa12.83□□□□□ -0.36
PKP4-206ENST00000452162 COL4A5P29400 1685 aa12.82□□□□□ -0.36
PKP4-206ENST00000452162 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
PKP4-206ENST00000452162 AK2P54819 239 aa12.82□□□□□ -0.36
PKP4-206ENST00000452162 LRRC24Q50LG9 513 aa12.82□□□□□ -0.36
PKP4-206ENST00000452162 CREB3L3Q68CJ9 461 aa12.82□□□□□ -0.36
PKP4-206ENST00000452162 GPR101Q96P66 508 aaPredicted RBP12.82□□□□□ -0.36
PKP4-206ENST00000452162 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
PKP4-206ENST00000452162 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
PKP4-206ENST00000452162 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
PKP4-206ENST00000452162 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
PKP4-206ENST00000452162 CASTP20810 708 aaKnown RBP12.81□□□□□ -0.36
PKP4-206ENST00000452162 ADCK5Q3MIX3 580 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 RUFY3Q7L099 469 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 BRD1O95696 1058 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 AOC3Q16853 763 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 ZNF589Q86UQ0 364 aaPredicted RBP12.81□□□□□ -0.36
PKP4-206ENST00000452162 TBC1D16Q8TBP0 767 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
PKP4-206ENST00000452162 XDHP47989 1333 aa12.81□□□□□ -0.36
PKP4-206ENST00000452162 SLC27A2O14975 620 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 CPA1P15085 419 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 CHRNDQ07001 517 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 L1TD1Q5T7N2 865 aaKnown RBP12.8□□□□□ -0.36
PKP4-206ENST00000452162 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 HELBQ8NG08 1087 aaPredicted RBP12.8□□□□□ -0.36
PKP4-206ENST00000452162 CNNM1Q9NRU3 951 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 LIMCH1Q9UPQ0 1083 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 NDUFB9Q9Y6M9 179 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 PPIP5K2O43314 1243 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 TAF5LO75529 589 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 UFL1O94874 794 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 MCTP1Q6DN14 999 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 SUPT20HQ8NEM7 779 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
PKP4-206ENST00000452162 GGA1Q9UJY5 639 aa12.8□□□□□ -0.36
PKP4-206ENST00000452162 SNAP23O00161 211 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 ZKSCAN1P17029 563 aaPredicted RBP12.79□□□□□ -0.36
PKP4-206ENST00000452162 TIMM10P62072 90 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 LARGE2Q8N3Y3 721 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 KBTBD3Q8NAB2 608 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 LMBRD1Q9NUN5 540 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 GOLGA6L3A6NEY3 463 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 WASHC4Q2M389 1173 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 PDRG1Q9NUG6 133 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 CYP46A1Q9Y6A2 500 aa12.79□□□□□ -0.36
PKP4-206ENST00000452162 A0A1B0GUL7 405 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 KCNJ4P48050 445 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 KIAA2012Q0VF49 1180 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 TICAM2Q86XR7 235 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 BRPF3Q9ULD4 1205 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 ATP2B4P23634 1241 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 TSGA10IPQ3SY00 556 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 ZNF526Q8TF50 670 aaPredicted RBP12.78□□□□□ -0.36
PKP4-206ENST00000452162 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
PKP4-206ENST00000452162 LARGE1O95461 756 aa12.77□□□□□ -0.36
PKP4-206ENST00000452162 CHGBP05060 677 aa12.77□□□□□ -0.36
PKP4-206ENST00000452162 RNF20Q5VTR2 975 aa12.77□□□□□ -0.36
PKP4-206ENST00000452162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.77□□□□□ -0.36
PKP4-206ENST00000452162 JDP2Q8WYK2 163 aa12.77□□□□□ -0.36
PKP4-206ENST00000452162 VPS33BQ9H267 617 aa12.77□□□□□ -0.36
PKP4-206ENST00000452162 PAG1Q9NWQ8 432 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms