RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 RNF135Q8IUD6 432 aa8.34□□□□□ -1.07
KARSP1-201ENST00000451871 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.07
KARSP1-201ENST00000451871 PLEKHM2Q8IWE5 1019 aa8.34□□□□□ -1.07
KARSP1-201ENST00000451871 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
KARSP1-201ENST00000451871 RTL1A6NKG5 1358 aa8.34□□□□□ -1.07
KARSP1-201ENST00000451871 SMG6Q86US8 1419 aaKnown RBP8.34□□□□□ -1.08
KARSP1-201ENST00000451871 SOWAHDA6NJG2 315 aa8.33□□□□□ -1.08
KARSP1-201ENST00000451871 MCCD1P59942 119 aaPredicted RBP8.33□□□□□ -1.08
KARSP1-201ENST00000451871 AGERQ15109 404 aa8.33□□□□□ -1.08
KARSP1-201ENST00000451871 DZIP3Q86Y13 1208 aaKnown RBP8.33□□□□□ -1.08
KARSP1-201ENST00000451871 PLPP7Q8NBV4 271 aa8.33□□□□□ -1.08
KARSP1-201ENST00000451871 HSP90AB2PQ58FF8 381 aa8.33□□□□□ -1.08
KARSP1-201ENST00000451871 FAM200AQ8TCP9 573 aa8.33□□□□□ -1.08
KARSP1-201ENST00000451871 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
KARSP1-201ENST00000451871 CNTNAP4Q9C0A0 1308 aa8.32□□□□□ -1.08
KARSP1-201ENST00000451871 ZNF831Q5JPB2 1677 aa8.32□□□□□ -1.08
KARSP1-201ENST00000451871 ROCK2O75116 1388 aaKnown RBP8.32□□□□□ -1.08
KARSP1-201ENST00000451871 NFKBIEO00221 500 aa8.32□□□□□ -1.08
KARSP1-201ENST00000451871 POLRMTO00411 1230 aaKnown RBP8.32□□□□□ -1.08
KARSP1-201ENST00000451871 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
KARSP1-201ENST00000451871 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
KARSP1-201ENST00000451871 SRP68Q9UHB9 627 aaKnown RBP8.32□□□□□ -1.08
KARSP1-201ENST00000451871 SPG7Q9UQ90 795 aa8.32□□□□□ -1.08
KARSP1-201ENST00000451871 AFDNP55196 1824 aaKnown RBP8.32□□□□□ -1.08
KARSP1-201ENST00000451871 INSRP06213 1382 aa8.31□□□□□ -1.08
KARSP1-201ENST00000451871 KDRP35968 1356 aa8.31□□□□□ -1.08
KARSP1-201ENST00000451871 ZNF16P17020 682 aaPredicted RBP8.31□□□□□ -1.08
KARSP1-201ENST00000451871 TM4SF1P30408 202 aa8.31□□□□□ -1.08
KARSP1-201ENST00000451871 DEFB115Q30KQ5 88 aa8.31□□□□□ -1.08
KARSP1-201ENST00000451871 TTLL6Q8N841 843 aa8.31□□□□□ -1.08
KARSP1-201ENST00000451871 CCDC85AQ96PX6 553 aaPredicted RBP8.31□□□□□ -1.08
KARSP1-201ENST00000451871 WDR33Q9C0J8 1336 aaKnown RBP8.31□□□□□ -1.08
KARSP1-201ENST00000451871 RASSF10A6NK89 507 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 DDNO94850 711 aaPredicted RBP8.3□□□□□ -1.08
KARSP1-201ENST00000451871 ATP2B4P23634 1241 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 TRIM32Q13049 653 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 DGKZQ13574 1117 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 LDHDQ86WU2 507 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 ANKLE1Q8NAG6 615 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 SLC17A8Q8NDX2 589 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 CLP1Q92989 425 aaKnown RBP8.3□□□□□ -1.08
KARSP1-201ENST00000451871 L3MBTL2Q969R5 705 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 C1QTNF2Q9BXJ5 285 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 DLEC1Q9Y238 1755 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 USP42Q9H9J4 1324 aaKnown RBP8.3□□□□□ -1.08
KARSP1-201ENST00000451871 SCN4AP35499 1836 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 FER1L6Q2WGJ9 1857 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 FXR1P51114 621 aaKnown RBP eCLIP8.3□□□□□ -1.08
KARSP1-201ENST00000451871 PPP1R18Q6NYC8 613 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 IFNL2Q8IZJ0 200 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 BCL2L13Q9BXK5 485 aa8.3□□□□□ -1.08
KARSP1-201ENST00000451871 PHKG2P15735 406 aa8.29□□□□□ -1.08
KARSP1-201ENST00000451871 SKOR1P84550 965 aa8.29□□□□□ -1.08
KARSP1-201ENST00000451871 DPYDQ12882 1025 aa8.29□□□□□ -1.08
KARSP1-201ENST00000451871 ANKMY2Q8IV38 441 aa8.29□□□□□ -1.08
KARSP1-201ENST00000451871 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
KARSP1-201ENST00000451871 ZNF594Q96JF6 807 aaPredicted RBP8.29□□□□□ -1.08
KARSP1-201ENST00000451871 BIN2Q9UBW5 565 aaPredicted RBP8.29□□□□□ -1.08
KARSP1-201ENST00000451871 A0A0C4DFX4 3053 aa8.28□□□□□ -1.08
KARSP1-201ENST00000451871 MARSP56192 900 aaKnown RBP8.28□□□□□ -1.08
KARSP1-201ENST00000451871 GIPC2Q8TF65 315 aa8.28□□□□□ -1.08
KARSP1-201ENST00000451871 SLC10A4Q96EP9 437 aa8.28□□□□□ -1.08
KARSP1-201ENST00000451871 PUS7Q96PZ0 661 aaKnown RBP8.28□□□□□ -1.08
KARSP1-201ENST00000451871 TAF1DQ9H5J8 278 aaPredicted RBP8.28□□□□□ -1.08
KARSP1-201ENST00000451871 IQCA1LA6NCM1 817 aa8.27□□□□□ -1.08
KARSP1-201ENST00000451871 ATP5J2-PTCD1G3V325 749 aa8.27□□□□□ -1.08
KARSP1-201ENST00000451871 FYB1O15117 783 aa8.27□□□□□ -1.08
KARSP1-201ENST00000451871 ZBTB24O43167 697 aaPredicted RBP8.27□□□□□ -1.08
KARSP1-201ENST00000451871 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.08
KARSP1-201ENST00000451871 CLDN10P78369 228 aa8.27□□□□□ -1.08
KARSP1-201ENST00000451871 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.08
KARSP1-201ENST00000451871 OGFOD1Q8N543 542 aa8.27□□□□□ -1.08
KARSP1-201ENST00000451871 FLT4P35916 1363 aa8.27□□□□□ -1.09
KARSP1-201ENST00000451871 ERVV-2B6SEH9 535 aa8.27□□□□□ -1.09
KARSP1-201ENST00000451871 H0YIN7 160 aa8.27□□□□□ -1.09
KARSP1-201ENST00000451871 C2CD5Q86YS7 1000 aa8.27□□□□□ -1.09
KARSP1-201ENST00000451871 TRMT44Q8IYL2 757 aaKnown RBP8.27□□□□□ -1.09
KARSP1-201ENST00000451871 GGNBP2Q9H3C7 697 aa8.27□□□□□ -1.09
KARSP1-201ENST00000451871 NRXN2Q9P2S2 1712 aa8.27□□□□□ -1.09
KARSP1-201ENST00000451871 NCAPD2Q15021 1401 aa8.27□□□□□ -1.09
KARSP1-201ENST00000451871 ESPNB1AK53 854 aa8.26□□□□□ -1.09
KARSP1-201ENST00000451871 C21orf2O43822 256 aa8.26□□□□□ -1.09
KARSP1-201ENST00000451871 ERCC3P19447 782 aa8.26□□□□□ -1.09
KARSP1-201ENST00000451871 EML3Q32P44 896 aa8.26□□□□□ -1.09
KARSP1-201ENST00000451871 EAPPQ56P03 285 aaPredicted RBP8.26□□□□□ -1.09
KARSP1-201ENST00000451871 USPL1Q5W0Q7 1092 aa8.26□□□□□ -1.09
KARSP1-201ENST00000451871 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
KARSP1-201ENST00000451871 KIF24Q5T7B8 1368 aa8.26□□□□□ -1.09
KARSP1-201ENST00000451871 TONSLQ96HA7 1378 aa8.26□□□□□ -1.09
KARSP1-201ENST00000451871 TRPM7Q96QT4 1865 aa8.25□□□□□ -1.09
KARSP1-201ENST00000451871 ANKRD33BA6NCL7 494 aa8.25□□□□□ -1.09
KARSP1-201ENST00000451871 PTCD1O75127 700 aaKnown RBP8.25□□□□□ -1.09
KARSP1-201ENST00000451871 SERPINB2P05120 415 aa8.25□□□□□ -1.09
KARSP1-201ENST00000451871 NFIXQ14938 502 aa8.25□□□□□ -1.09
KARSP1-201ENST00000451871 NBPF20Q3BBV1 942 aa8.25□□□□□ -1.09
KARSP1-201ENST00000451871 CNTROBQ8N137 903 aa8.25□□□□□ -1.09
KARSP1-201ENST00000451871 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
KARSP1-201ENST00000451871 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.25□□□□□ -1.09
KARSP1-201ENST00000451871 ABT1Q9ULW3 272 aaKnown RBP8.25□□□□□ -1.09
KARSP1-201ENST00000451871 LZTS3O60299 673 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms