RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 NAPAP54920 295 aa13.05□□□□□ -0.32
BRPF3-206ENST00000449261 PUM3Q15397 648 aaKnown RBP13.05□□□□□ -0.32
BRPF3-206ENST00000449261 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
BRPF3-206ENST00000449261 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
BRPF3-206ENST00000449261 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
BRPF3-206ENST00000449261 PNMA6EA0A0J9YXQ4 647 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 CAVIN2O95810 425 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 IQCEQ6IPM2 695 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.04□□□□□ -0.32
BRPF3-206ENST00000449261 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
BRPF3-206ENST00000449261 TMEM94Q12767 1356 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 KIF2AO00139 706 aaPredicted RBP13.04□□□□□ -0.32
BRPF3-206ENST00000449261 UFL1O94874 794 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 F13A1P00488 732 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
BRPF3-206ENST00000449261 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
BRPF3-206ENST00000449261 USP21Q9UK80 565 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
BRPF3-206ENST00000449261 LEKR1Q6ZMV7 388 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 XAGE2Q96GT9 111 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 HELLSQ9NRZ9 838 aa13.04□□□□□ -0.32
BRPF3-206ENST00000449261 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
BRPF3-206ENST00000449261 MRPS27Q92552 414 aaKnown RBP13.03□□□□□ -0.32
BRPF3-206ENST00000449261 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 MYO5CQ9NQX4 1742 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 TRIM75PA6NK02 468 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
BRPF3-206ENST00000449261 DNM1Q05193 864 aaKnown RBP13.03□□□□□ -0.32
BRPF3-206ENST00000449261 CETN1Q12798 172 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 STXBP4Q6ZWJ1 553 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 ERMNQ8TAM6 284 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 UBXN4Q92575 508 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 GOLGA6L10A6NI86 522 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 KCNQ3O43525 872 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 GIGYF1O75420 1035 aaPredicted RBP13.03□□□□□ -0.32
BRPF3-206ENST00000449261 TRIM21P19474 475 aaKnown RBP13.03□□□□□ -0.32
BRPF3-206ENST00000449261 FAM43BQ6ZT52 329 aaPredicted RBP13.03□□□□□ -0.32
BRPF3-206ENST00000449261 TMEM51Q9NW97 253 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 RTL9Q8NET4 1388 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
BRPF3-206ENST00000449261 PHKG2P15735 406 aa13.02□□□□□ -0.32
BRPF3-206ENST00000449261 CALML3P27482 149 aa13.02□□□□□ -0.32
BRPF3-206ENST00000449261 TTC6Q86TZ1 520 aa13.02□□□□□ -0.32
BRPF3-206ENST00000449261 SEC24BO95487 1268 aa13.02□□□□□ -0.32
BRPF3-206ENST00000449261 YEATS4O95619 227 aa13.02□□□□□ -0.32
BRPF3-206ENST00000449261 USP48Q86UV5 1035 aa13.02□□□□□ -0.32
BRPF3-206ENST00000449261 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 CETN2P41208 172 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 AFMP43652 599 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 RUFY3Q7L099 469 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 TMC6Q7Z403 805 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 INSRP06213 1382 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 TBCAO75347 108 aaKnown RBP13.02□□□□□ -0.33
BRPF3-206ENST00000449261 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 RXRAP19793 462 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 TEX11Q8IYF3 940 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 C6orf50Q9HD87 102 aa13.02□□□□□ -0.33
BRPF3-206ENST00000449261 PLXNC1O60486 1568 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 KIF5CO60282 957 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 KIF4BQ2VIQ3 1234 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 JAKMIP3Q5VZ66 844 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 DACT1Q9NYF0 836 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 PLEKHG1Q9ULL1 1385 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 MLH3Q9UHC1 1453 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 ZMYM4Q5VZL5 1548 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 CPA1P15085 419 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 APPBP2Q92624 585 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 EFCAB6Q5THR3 1501 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 KIF1CO43896 1103 aaKnown RBP13.01□□□□□ -0.33
BRPF3-206ENST00000449261 TAF5LO75529 589 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 ADCY5O95622 1261 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 ZNF513Q8N8E2 541 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-206ENST00000449261 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 TRIM47Q96LD4 638 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 SPTLC2O15270 562 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 STAT6P42226 847 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 NUCKS1Q9H1E3 243 aaKnown RBP13.01□□□□□ -0.33
BRPF3-206ENST00000449261 EXOC1Q9NV70 894 aa13.01□□□□□ -0.33
BRPF3-206ENST00000449261 GSDMDP57764 484 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 GABPB1Q06547 395 aaPredicted RBP13□□□□□ -0.33
BRPF3-206ENST00000449261 TCIRG1Q13488 830 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 KIF18AQ8NI77 898 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 GGA1Q9UJY5 639 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 ZSCAN23Q3MJ62 389 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 RPAINQ86UA6 219 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 FAM114A1Q8IWE2 563 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 RRP36Q96EU6 259 aaKnown RBP13□□□□□ -0.33
BRPF3-206ENST00000449261 RMND1Q9NWS8 449 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
BRPF3-206ENST00000449261 N4BP3O15049 544 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms