RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ZNF532Q9HCE3 1301 aa20.72■□□□□ 0.91
SMC6-206ENST00000446852 TCRBV5S4A2TA0A5A2 114 aa20.71■□□□□ 0.91
SMC6-206ENST00000446852 ZPR1O75312 459 aa20.71■□□□□ 0.91
SMC6-206ENST00000446852 F13A1P00488 732 aa20.71■□□□□ 0.91
SMC6-206ENST00000446852 BCAMP50895 628 aa20.71■□□□□ 0.91
SMC6-206ENST00000446852 UBE3CQ15386 1083 aa20.71■□□□□ 0.91
SMC6-206ENST00000446852 SLC10A5Q5PT55 438 aa20.71■□□□□ 0.91
SMC6-206ENST00000446852 GTF3C6Q969F1 213 aa20.71■□□□□ 0.91
SMC6-206ENST00000446852 ARHGEF1Q92888 912 aaKnown RBP20.71■□□□□ 0.91
SMC6-206ENST00000446852 BRWD3Q6RI45 1802 aa20.71■□□□□ 0.91
SMC6-206ENST00000446852 NCLP19338 710 aaKnown RBP20.7■□□□□ 0.9
SMC6-206ENST00000446852 GTF2E1P29083 439 aaPredicted RBP20.7■□□□□ 0.9
SMC6-206ENST00000446852 HAND2P61296 217 aa20.7■□□□□ 0.9
SMC6-206ENST00000446852 CAVIN1Q6NZI2 390 aaKnown RBP20.7■□□□□ 0.9
SMC6-206ENST00000446852 GAS2L3Q86XJ1 694 aa20.7■□□□□ 0.9
SMC6-206ENST00000446852 ANKRD18AQ8IVF6 992 aa20.7■□□□□ 0.9
SMC6-206ENST00000446852 SETDB2Q96T68 719 aa20.7■□□□□ 0.9
SMC6-206ENST00000446852 CTNNA3Q9UI47 895 aa20.7■□□□□ 0.9
SMC6-206ENST00000446852 NSFL1CQ9UNZ2 370 aaKnown RBP20.7■□□□□ 0.9
SMC6-206ENST00000446852 GDPD2Q9HCC8 539 aa20.7■□□□□ 0.9
SMC6-206ENST00000446852 BRPF3Q9ULD4 1205 aa20.7■□□□□ 0.9
SMC6-206ENST00000446852 AGXT2Q9BYV1 514 aa20.69■□□□□ 0.9
SMC6-206ENST00000446852 TNRC6CQ9HCJ0 1690 aaKnown RBP20.69■□□□□ 0.9
SMC6-206ENST00000446852 WTIPA6NIX2 430 aaPredicted RBP20.69■□□□□ 0.9
SMC6-206ENST00000446852 XRCC6P12956 609 aaKnown RBP eCLIP20.69■□□□□ 0.9
SMC6-206ENST00000446852 IMMTQ16891 758 aaKnown RBP20.69■□□□□ 0.9
SMC6-206ENST00000446852 NBPF5PQ86XG9 351 aaPredicted RBP20.69■□□□□ 0.9
SMC6-206ENST00000446852 CELF1Q92879 486 aaKnown RBP20.69■□□□□ 0.9
SMC6-206ENST00000446852 NYXQ9GZU5 481 aa20.69■□□□□ 0.9
SMC6-206ENST00000446852 BSDC1Q9NW68 430 aaPredicted RBP20.68■□□□□ 0.9
SMC6-206ENST00000446852 UBR3Q6ZT12 1888 aa20.68■□□□□ 0.9
SMC6-206ENST00000446852 FGD1P98174 961 aa20.68■□□□□ 0.9
SMC6-206ENST00000446852 CHST3Q7LGC8 479 aa20.68■□□□□ 0.9
SMC6-206ENST00000446852 VPS37CA5D8V6 355 aaPredicted RBP20.67■□□□□ 0.9
SMC6-206ENST00000446852 LARP1BQ659C4 914 aaKnown RBP20.67■□□□□ 0.9
SMC6-206ENST00000446852 CCDC24Q8N4L8 307 aa20.67■□□□□ 0.9
SMC6-206ENST00000446852 LRRC4BQ9NT99 713 aa20.67■□□□□ 0.9
SMC6-206ENST00000446852 RBM27Q9P2N5 1060 aaKnown RBP20.67■□□□□ 0.9
SMC6-206ENST00000446852 CNPY2Q9Y2B0 182 aa20.67■□□□□ 0.9
SMC6-206ENST00000446852 CHD4Q14839 1912 aa20.67■□□□□ 0.9
SMC6-206ENST00000446852 PHF14O94880 888 aa20.67■□□□□ 0.9
SMC6-206ENST00000446852 APOBRQ0VD83 1088 aa20.67■□□□□ 0.9
SMC6-206ENST00000446852 JAK2O60674 1132 aa20.66■□□□□ 0.9
SMC6-206ENST00000446852 SCRN1Q12765 414 aa20.66■□□□□ 0.9
SMC6-206ENST00000446852 USP48Q86UV5 1035 aa20.66■□□□□ 0.9
SMC6-206ENST00000446852 BCL11BQ9C0K0 894 aaPredicted RBP20.66■□□□□ 0.9
SMC6-206ENST00000446852 MINPP1Q9UNW1 487 aa20.66■□□□□ 0.9
SMC6-206ENST00000446852 FAM196AQ6ZSG2 479 aa20.66■□□□□ 0.9
SMC6-206ENST00000446852 MAGEB6Q8N7X4 407 aa20.66■□□□□ 0.9
SMC6-206ENST00000446852 NBPF3Q9H094 633 aa20.66■□□□□ 0.9
SMC6-206ENST00000446852 ISY1Q9ULR0 285 aaKnown RBP20.66■□□□□ 0.9
SMC6-206ENST00000446852 ZNF804BA4D1E1 1349 aa20.66■□□□□ 0.9
SMC6-206ENST00000446852 PFKFB2O60825 505 aa20.65■□□□□ 0.9
SMC6-206ENST00000446852 GADD45BO75293 160 aaPredicted RBP20.65■□□□□ 0.9
SMC6-206ENST00000446852 ZSCAN23Q3MJ62 389 aa20.65■□□□□ 0.9
SMC6-206ENST00000446852 CDC37L1Q7L3B6 337 aa20.65■□□□□ 0.9
SMC6-206ENST00000446852 TMEM87AQ8NBN3 555 aa20.65■□□□□ 0.9
SMC6-206ENST00000446852 QTRT2Q9H974 415 aaKnown RBP20.65■□□□□ 0.9
SMC6-206ENST00000446852 MYH13Q9UKX3 1938 aa20.65■□□□□ 0.9
SMC6-206ENST00000446852 COL1A1P02452 1464 aaPredicted RBP20.65■□□□□ 0.9
SMC6-206ENST00000446852 MAP3K12Q12852 859 aa20.65■□□□□ 0.9
SMC6-206ENST00000446852 NLRP3Q96P20 1036 aa20.65■□□□□ 0.9
SMC6-206ENST00000446852 GRPEL1Q9HAV7 217 aa20.65■□□□□ 0.9
SMC6-206ENST00000446852 IQSEC3Q9UPP2 1182 aaPredicted RBP20.65■□□□□ 0.9
SMC6-206ENST00000446852 MBD3O95983 291 aa20.64■□□□□ 0.9
SMC6-206ENST00000446852 PDCP20941 246 aa20.64■□□□□ 0.9
SMC6-206ENST00000446852 GYG1P46976 350 aa20.64■□□□□ 0.9
SMC6-206ENST00000446852 MRE11P49959 708 aa20.64■□□□□ 0.9
SMC6-206ENST00000446852 TPTE2Q6XPS3 522 aa20.64■□□□□ 0.9
SMC6-206ENST00000446852 STRBPQ96SI9 672 aaKnown RBP20.64■□□□□ 0.9
SMC6-206ENST00000446852 TMEM63CQ9P1W3 806 aa20.64■□□□□ 0.9
SMC6-206ENST00000446852 ATP6V1DQ9Y5K8 247 aa20.64■□□□□ 0.9
SMC6-206ENST00000446852 ZNF213O14771 459 aa20.64■□□□□ 0.89
SMC6-206ENST00000446852 RFC4P35249 363 aa20.64■□□□□ 0.89
SMC6-206ENST00000446852 MB21D2Q8IYB1 491 aaPredicted RBP20.64■□□□□ 0.89
SMC6-206ENST00000446852 PANK2Q9BZ23 570 aa20.64■□□□□ 0.89
SMC6-206ENST00000446852 UBE4AQ14139 1066 aa20.63■□□□□ 0.89
SMC6-206ENST00000446852 TRAPPC3LQ5T215 181 aa20.63■□□□□ 0.89
SMC6-206ENST00000446852 AIDAQ96BJ3 306 aa20.63■□□□□ 0.89
SMC6-206ENST00000446852 GPHNQ9NQX3 736 aaPredicted RBP20.63■□□□□ 0.89
SMC6-206ENST00000446852 ZNF445P59923 1031 aa20.63■□□□□ 0.89
SMC6-206ENST00000446852 FBXL16Q8N461 479 aa20.63■□□□□ 0.89
SMC6-206ENST00000446852 DNM1Q05193 864 aaKnown RBP20.62■□□□□ 0.89
SMC6-206ENST00000446852 MBD4O95243 580 aa20.62■□□□□ 0.89
SMC6-206ENST00000446852 APPP05067 770 aa20.62■□□□□ 0.89
SMC6-206ENST00000446852 ANTXR2P58335 489 aa20.62■□□□□ 0.89
SMC6-206ENST00000446852 RPS8P62241 208 aaKnown RBP20.62■□□□□ 0.89
SMC6-206ENST00000446852 TBC1D10CQ8IV04 446 aa20.62■□□□□ 0.89
SMC6-206ENST00000446852 SMARCC2Q8TAQ2 1214 aa20.62■□□□□ 0.89
SMC6-206ENST00000446852 CACNA1SQ13698 1873 aa20.61■□□□□ 0.89
SMC6-206ENST00000446852 CTDNEP1O95476 244 aa20.61■□□□□ 0.89
SMC6-206ENST00000446852 PDIA4P13667 645 aaKnown RBP20.61■□□□□ 0.89
SMC6-206ENST00000446852 FERMT3Q86UX7 667 aa20.61■□□□□ 0.89
SMC6-206ENST00000446852 DENND2AQ9ULE3 1009 aa20.61■□□□□ 0.89
SMC6-206ENST00000446852 PRC1O43663 620 aa20.61■□□□□ 0.89
SMC6-206ENST00000446852 PDIA3P30101 505 aaKnown RBP20.61■□□□□ 0.89
SMC6-206ENST00000446852 NSUN7Q8NE18 718 aaKnown RBP20.61■□□□□ 0.89
SMC6-206ENST00000446852 NCOA7Q8NI08 942 aa20.61■□□□□ 0.89
SMC6-206ENST00000446852 ARMT1Q9H993 441 aa20.61■□□□□ 0.89
SMC6-206ENST00000446852 EPB41L4AQ9HCS5 686 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms