RNA–Protein interactions for RNA: ENST00000444184.5

LINC00963-205, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 1,887 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-205ENST00000444184 BCL11BQ9C0K0 894 aaPredicted RBP23.01■■□□□ 1.27
LINC00963-205ENST00000444184 LARP1BQ659C4 914 aaKnown RBP23■■□□□ 1.27
LINC00963-205ENST00000444184 CAVIN1Q6NZI2 390 aaKnown RBP23■■□□□ 1.27
LINC00963-205ENST00000444184 KRT27Q7Z3Y8 459 aa23■■□□□ 1.27
LINC00963-205ENST00000444184 MTMR6Q9Y217 621 aa23■■□□□ 1.27
LINC00963-205ENST00000444184 PDE6AP16499 860 aa23■■□□□ 1.27
LINC00963-205ENST00000444184 PDCP20941 246 aa23■■□□□ 1.27
LINC00963-205ENST00000444184 RBM6P78332 1123 aaKnown RBP23■■□□□ 1.27
LINC00963-205ENST00000444184 RASGRF1Q13972 1273 aa23■■□□□ 1.27
LINC00963-205ENST00000444184 GTF3C6Q969F1 213 aa23■■□□□ 1.27
LINC00963-205ENST00000444184 ZNF532Q9HCE3 1301 aa22.99■■□□□ 1.27
LINC00963-205ENST00000444184 BCAMP50895 628 aa22.99■■□□□ 1.27
LINC00963-205ENST00000444184 ARAP2Q8WZ64 1704 aa22.99■■□□□ 1.27
LINC00963-205ENST00000444184 MBD3O95983 291 aa22.98■■□□□ 1.27
LINC00963-205ENST00000444184 MRE11P49959 708 aa22.98■■□□□ 1.27
LINC00963-205ENST00000444184 NBPF5PQ86XG9 351 aaPredicted RBP22.98■■□□□ 1.27
LINC00963-205ENST00000444184 ARHGEF1Q92888 912 aaKnown RBP22.98■■□□□ 1.27
LINC00963-205ENST00000444184 WWC3Q9ULE0 1092 aa22.98■■□□□ 1.27
LINC00963-205ENST00000444184 MYH7P12883 1935 aa22.98■■□□□ 1.27
LINC00963-205ENST00000444184 XRCC6P12956 609 aaKnown RBP eCLIP22.98■■□□□ 1.27
LINC00963-205ENST00000444184 HAND2P61296 217 aa22.98■■□□□ 1.27
LINC00963-205ENST00000444184 MAP3K12Q12852 859 aa22.98■■□□□ 1.27
LINC00963-205ENST00000444184 FAM196AQ6ZSG2 479 aa22.98■■□□□ 1.27
LINC00963-205ENST00000444184 BSDC1Q9NW68 430 aaPredicted RBP22.98■■□□□ 1.27
LINC00963-205ENST00000444184 SCN7AQ01118 1682 aa22.97■■□□□ 1.27
LINC00963-205ENST00000444184 VPS37CA5D8V6 355 aaPredicted RBP22.97■■□□□ 1.27
LINC00963-205ENST00000444184 USP48Q86UV5 1035 aa22.97■■□□□ 1.27
LINC00963-205ENST00000444184 NLRP3Q96P20 1036 aa22.97■■□□□ 1.27
LINC00963-205ENST00000444184 TCRBV5S4A2TA0A5A2 114 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 ZNF213O14771 459 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 TPTE2Q6XPS3 522 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 AGXT2Q9BYV1 514 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 EP400Q96L91 3159 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 GAS2L3Q86XJ1 694 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 GRPEL1Q9HAV7 217 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 GDPD2Q9HCC8 539 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 BRPF3Q9ULD4 1205 aa22.96■■□□□ 1.27
LINC00963-205ENST00000444184 PFKFB2O60825 505 aa22.95■■□□□ 1.26
LINC00963-205ENST00000444184 APOBRQ0VD83 1088 aa22.95■■□□□ 1.26
LINC00963-205ENST00000444184 TRAPPC3LQ5T215 181 aa22.95■■□□□ 1.26
LINC00963-205ENST00000444184 AIDAQ96BJ3 306 aa22.95■■□□□ 1.26
LINC00963-205ENST00000444184 APPP05067 770 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 RFC4P35249 363 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 UBE4AQ14139 1066 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 CHST3Q7LGC8 479 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 AMIGO3Q86WK7 504 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 CNPY2Q9Y2B0 182 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 C4BP0C0L5 1744 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 ZSCAN23Q3MJ62 389 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 MAGEB6Q8N7X4 407 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 TMEM87AQ8NBN3 555 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 CELF1Q92879 486 aaKnown RBP22.94■■□□□ 1.26
LINC00963-205ENST00000444184 MINPP1Q9UNW1 487 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 NSFL1CQ9UNZ2 370 aaKnown RBP22.94■■□□□ 1.26
LINC00963-205ENST00000444184 LAMA4Q16363 1823 aa22.94■■□□□ 1.26
LINC00963-205ENST00000444184 SCRN1Q12765 414 aa22.93■■□□□ 1.26
LINC00963-205ENST00000444184 STRBPQ96SI9 672 aaKnown RBP22.93■■□□□ 1.26
LINC00963-205ENST00000444184 GNL3LQ9NVN8 582 aaKnown RBP22.93■■□□□ 1.26
LINC00963-205ENST00000444184 RBM27Q9P2N5 1060 aaKnown RBP22.93■■□□□ 1.26
LINC00963-205ENST00000444184 PHF14O94880 888 aa22.92■■□□□ 1.26
LINC00963-205ENST00000444184 ZNF445P59923 1031 aa22.92■■□□□ 1.26
LINC00963-205ENST00000444184 FBXL16Q8N461 479 aa22.92■■□□□ 1.26
LINC00963-205ENST00000444184 NCOA7Q8NI08 942 aa22.92■■□□□ 1.26
LINC00963-205ENST00000444184 LLPHQ9BRT6 129 aaKnown RBP22.92■■□□□ 1.26
LINC00963-205ENST00000444184 COL4A1P02462 1669 aa22.92■■□□□ 1.26
LINC00963-205ENST00000444184 JAK2O60674 1132 aa22.92■■□□□ 1.26
LINC00963-205ENST00000444184 MCM5P33992 734 aa22.92■■□□□ 1.26
LINC00963-205ENST00000444184 RPS8P62241 208 aaKnown RBP22.92■■□□□ 1.26
LINC00963-205ENST00000444184 ZNF274Q96GC6 653 aaPredicted RBP22.92■■□□□ 1.26
LINC00963-205ENST00000444184 GADD45BO75293 160 aaPredicted RBP22.91■■□□□ 1.26
LINC00963-205ENST00000444184 RALYLQ86SE5 291 aaKnown RBP22.91■■□□□ 1.26
LINC00963-205ENST00000444184 LRRC4BQ9NT99 713 aa22.91■■□□□ 1.26
LINC00963-205ENST00000444184 NAP1L2Q9ULW6 460 aaPredicted RBP22.91■■□□□ 1.26
LINC00963-205ENST00000444184 MYO5AQ9Y4I1 1855 aaKnown RBP22.9■■□□□ 1.26
LINC00963-205ENST00000444184 GYG1P46976 350 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 CSPP1Q1MSJ5 1256 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 CDC37L1Q7L3B6 337 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 MB21D2Q8IYB1 491 aaPredicted RBP22.9■■□□□ 1.26
LINC00963-205ENST00000444184 CCDC24Q8N4L8 307 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 CHMP4CQ96CF2 233 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 TMEM63CQ9P1W3 806 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 LRP2BPQ9P2M1 347 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 NPHP1O15259 732 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 PRC1O43663 620 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 TRIM37O94972 964 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 DNM1Q05193 864 aaKnown RBP22.9■■□□□ 1.26
LINC00963-205ENST00000444184 CAVIN4Q5BKX8 364 aa22.9■■□□□ 1.26
LINC00963-205ENST00000444184 ZNF804BA4D1E1 1349 aa22.89■■□□□ 1.25
LINC00963-205ENST00000444184 PATL2C9JE40 543 aaKnown RBP22.89■■□□□ 1.25
LINC00963-205ENST00000444184 MBD4O95243 580 aa22.89■■□□□ 1.25
LINC00963-205ENST00000444184 PDIA3P30101 505 aaKnown RBP22.89■■□□□ 1.25
LINC00963-205ENST00000444184 TRDNQ13061 729 aa22.89■■□□□ 1.25
LINC00963-205ENST00000444184 ALX1Q15699 326 aa22.89■■□□□ 1.25
LINC00963-205ENST00000444184 FAM184AQ8NB25 1140 aa22.89■■□□□ 1.25
LINC00963-205ENST00000444184 SMARCC2Q8TAQ2 1214 aa22.89■■□□□ 1.25
LINC00963-205ENST00000444184 IQSEC3Q9UPP2 1182 aaPredicted RBP22.89■■□□□ 1.25
LINC00963-205ENST00000444184 FIBPO43427 364 aa22.88■■□□□ 1.25
LINC00963-205ENST00000444184 CCT2P78371 535 aaKnown RBP22.88■■□□□ 1.25
LINC00963-205ENST00000444184 VPS37DQ86XT2 251 aa22.88■■□□□ 1.25
LINC00963-205ENST00000444184 DDX11Q96FC9 970 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms