RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 LDHBP07195 334 aaKnown RBP8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 C1QTNF8P60827 252 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 CXCL9Q07325 125 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 TNFAIP1Q13829 316 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 SLC10A5Q5PT55 438 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 ABCA3Q99758 1704 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 BAG4O95429 457 aaKnown RBP8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 ZNF445P59923 1031 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 CHADLQ6NUI6 762 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 CCDC8Q9H0W5 538 aaPredicted RBP8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 ABCC12Q96J65 1359 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 C5P01031 1676 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 CELF2O95319 508 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 ATP2B2Q01814 1243 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 PICALMQ13492 652 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 PUM3Q15397 648 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 CDC37L1Q7L3B6 337 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 SAMD7Q7Z3H4 446 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 TBC1D22AQ8WUA7 517 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 SGIP1Q9BQI5 828 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 MROH5Q6ZUA9 1318 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 H7C1W4 665 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 SNAP23O00161 211 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 USP5P45974 858 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 KLHL40Q2TBA0 621 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 USP48Q86UV5 1035 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 CNTROBQ8N137 903 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 GPC2Q8N158 579 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 STAP2Q9UGK3 403 aa8.84□□□□□ -0.99
CDC42BPA-208ENST00000442054 BAG3O95817 575 aa8.84□□□□□ -1
CDC42BPA-208ENST00000442054 ECE1P42892 770 aa8.84□□□□□ -1
CDC42BPA-208ENST00000442054 KIAA2012Q0VF49 1180 aa8.84□□□□□ -1
CDC42BPA-208ENST00000442054 C3orf67Q6ZVT6 689 aa8.84□□□□□ -1
CDC42BPA-208ENST00000442054 PDLIM2Q96JY6 352 aa8.84□□□□□ -1
CDC42BPA-208ENST00000442054 ADARB2Q9NS39 739 aaKnown RBP8.84□□□□□ -1
CDC42BPA-208ENST00000442054 MRC1P22897 1456 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 PSMD14O00487 310 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 HOXA10P31260 410 aaPredicted RBP8.83□□□□□ -1
CDC42BPA-208ENST00000442054 EPS15P42566 896 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 HUNKP57058 714 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 RABEP1Q15276 862 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 ARMC9Q7Z3E5 817 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 WDR66Q8TBY9 1149 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 IL25Q9H293 177 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 NFKBIEO00221 500 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 TIMM10P62072 90 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 CUL4AQ13619 759 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 UBE4AQ14139 1066 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 TEKT1Q969V4 418 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 PSMD1Q99460 953 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 CSADQ9Y600 493 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 COL18A1P39060 1754 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 TCP10L2B9ZVM9 353 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 SASH1O94885 1247 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 SUPT20HL1Q3ZLR7 823 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 GPT2Q8TD30 523 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 LPIN2Q92539 896 aa8.83□□□□□ -1
CDC42BPA-208ENST00000442054 DOT1LQ8TEK3 1739 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 MAST3O60307 1309 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
CDC42BPA-208ENST00000442054 UQCRFS1P1P0C7P4 283 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 WDR78Q5VTH9 848 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 RILPL2Q969X0 211 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 PUS3Q9BZE2 481 aaKnown RBP8.82□□□□□ -1
CDC42BPA-208ENST00000442054 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.82□□□□□ -12e-6■■■■□ 23.8
CDC42BPA-208ENST00000442054 CAPN15O75808 1086 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 TCP10Q12799 353 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 MAP3K12Q12852 859 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 DENND2AQ9ULE3 1009 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 CDHR2Q9BYE9 1310 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 DDX60Q8IY21 1712 aaKnown RBP8.82□□□□□ -1
CDC42BPA-208ENST00000442054 BTAF1O14981 1849 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 POLR3DP05423 398 aaPredicted RBP8.82□□□□□ -1
CDC42BPA-208ENST00000442054 PDE1AP54750 535 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 GSTO1P78417 241 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 LRRC24Q50LG9 513 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 LDHDQ86WU2 507 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 HOOK2Q96ED9 719 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 GGA3Q9NZ52 723 aa8.82□□□□□ -1
CDC42BPA-208ENST00000442054 SCN11AQ9UI33 1791 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 ERC2O15083 957 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 BCAMP50895 628 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 USP44Q9H0E7 712 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 CD209Q9NNX6 404 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 MYO3BQ8WXR4 1341 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 ZNF157P51786 506 aaPredicted RBP8.81□□□□□ -1
CDC42BPA-208ENST00000442054 SKOR2Q2VWA4 1001 aaPredicted RBP8.81□□□□□ -1
CDC42BPA-208ENST00000442054 SLC10A4Q96EP9 437 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 ANGEL1Q9UNK9 670 aaKnown RBP8.81□□□□□ -1
CDC42BPA-208ENST00000442054 PDE8BO95263 885 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 FGD1P98174 961 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 POLA2Q14181 598 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 SLC4A8Q2Y0W8 1093 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 DEFB115Q30KQ5 88 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 ANGEL2Q5VTE6 544 aaKnown RBP8.81□□□□□ -1
CDC42BPA-208ENST00000442054 OTUD7BQ6GQQ9 843 aa8.81□□□□□ -1
CDC42BPA-208ENST00000442054 STK11IPQ8N1F8 1099 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms