RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CCDC152Q4G0S7 254 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 CCDC102BQ68D86 513 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 RALYLQ86SE5 291 aaKnown RBP12.29□□□□□ -0.44
CPNE1-218ENST00000439806 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 NCOA7Q8NI08 942 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 SMARCC2Q8TAQ2 1214 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 ZNF274Q96GC6 653 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-218ENST00000439806 SPATA32Q96LK8 384 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 AGXT2Q9BYV1 514 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 ZSCAN16Q9H4T2 348 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-218ENST00000439806 ZNF652Q9Y2D9 606 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 PTPDC1A2A3K4 754 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 ZNF213O14771 459 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
CPNE1-218ENST00000439806 MCM5P33992 734 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 PHKA1P46020 1223 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 FOSBP53539 338 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 CCT2P78371 535 aaKnown RBP12.28□□□□□ -0.44
CPNE1-218ENST00000439806 ITPK1Q13572 414 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 NSUN7Q8NE18 718 aaKnown RBP12.28□□□□□ -0.44
CPNE1-218ENST00000439806 HELBQ8NG08 1087 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-218ENST00000439806 PUS7LQ9H0K6 701 aaKnown RBP12.28□□□□□ -0.44
CPNE1-218ENST00000439806 PIH1D3Q9NQM4 214 aaKnown RBP12.28□□□□□ -0.44
CPNE1-218ENST00000439806 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPNE1-218ENST00000439806 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
CPNE1-218ENST00000439806 SCN7AQ01118 1682 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 PRC1O43663 620 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 TOM1O60784 492 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 FGAP02671 866 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 FGFR2P21802 821 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 MSNP26038 577 aaKnown RBP12.27□□□□□ -0.45
CPNE1-218ENST00000439806 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 HS1BP3Q53T59 392 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 SLC9C2Q5TAH2 1124 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 NAA16Q6N069 864 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-218ENST00000439806 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 CHST3Q7LGC8 479 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 TFIP11Q9UBB9 837 aaKnown RBP12.27□□□□□ -0.45
CPNE1-218ENST00000439806 WDR19Q8NEZ3 1342 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 RTL9Q8NET4 1388 aa12.27□□□□□ -0.45
CPNE1-218ENST00000439806 NTSR2O95665 410 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 APPP05067 770 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 PDE6AP16499 860 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 PDIA3P30101 505 aaKnown RBP12.26□□□□□ -0.45
CPNE1-218ENST00000439806 TRDNQ13061 729 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 ZSCAN30Q86W11 494 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 MB21D2Q8IYB1 491 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-218ENST00000439806 FBXL16Q8N461 479 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 LEO1Q8WVC0 666 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-218ENST00000439806 PDLIM2Q96JY6 352 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 ZNF396Q96N95 335 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-218ENST00000439806 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 CCDC39Q9UFE4 941 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 CFAP45Q9UL16 551 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 ZNF532Q9HCE3 1301 aa12.26□□□□□ -0.45
CPNE1-218ENST00000439806 KLF18A0A0U1RQI7 1052 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 FOXP2O15409 715 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 DHX16O60231 1041 aaKnown RBP12.25□□□□□ -0.45
CPNE1-218ENST00000439806 CTDNEP1O95476 244 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 MAP3K12Q12852 859 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 GIMAP6Q6P9H5 292 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 SPATA5Q8NB90 893 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 CDC5LQ99459 802 aaKnown RBP12.25□□□□□ -0.45
CPNE1-218ENST00000439806 NCOA5Q9HCD5 579 aaKnown RBP12.25□□□□□ -0.45
CPNE1-218ENST00000439806 SEC31BQ9NQW1 1179 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 DDX19AQ9NUU7 478 aaKnown RBP12.25□□□□□ -0.45
CPNE1-218ENST00000439806 ECM29Q5VYK3 1845 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 MYH13Q9UKX3 1938 aa12.25□□□□□ -0.45
CPNE1-218ENST00000439806 GOLGA8BA8MQT2 603 aa12.24□□□□□ -0.45
CPNE1-218ENST00000439806 BTAF1O14981 1849 aa12.24□□□□□ -0.45
CPNE1-218ENST00000439806 PTMAP06454 111 aaKnown RBP12.24□□□□□ -0.45
CPNE1-218ENST00000439806 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
CPNE1-218ENST00000439806 WWC3Q9ULE0 1092 aa12.24□□□□□ -0.45
CPNE1-218ENST00000439806 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 SALL1Q9NSC2 1324 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 CPLX1O14810 134 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 CCDC192P0DO97 292 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 LIG1P18858 919 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 EVCP57679 992 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 MAP3K11Q16584 847 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
CPNE1-218ENST00000439806 ATL3Q6DD88 541 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 MAGEB6Q8N7X4 407 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 TNMDQ9H2S6 317 aa12.23□□□□□ -0.45
CPNE1-218ENST00000439806 ZMYM6O95789 1325 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 TCRBV5S4A2TA0A5A2 114 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 KCNQ2O43526 872 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 ANTXR2P58335 489 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 CHRNDQ07001 517 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 RASGRF1Q13972 1273 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 ALX1Q15699 326 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 CLEC4GQ6UXB4 293 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 ANKRD18AQ8IVF6 992 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 FUCA2Q9BTY2 467 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms