RNA–Protein interactions for RNA: ENST00000435331.3

HCG2040054-201, humanhuman

TSL 3 BASIC

Gene HCG2040054, Length 434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG2040054-201ENST00000435331 DALRD3Q5D0E6 543 aaKnown RBP4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 TSHZ3Q63HK5 1081 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 MSL1Q68DK7 614 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 PRPF40BQ6NWY9 871 aaKnown RBP4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 HHIPL2Q6UWX4 724 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 CWC27Q6UX04 472 aaKnown RBP4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 ILDR2Q71H61 639 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 SLF2Q8IX21 1173 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 OSBP2Q969R2 916 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 NSUN4Q96CB9 384 aaKnown RBP4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 MTA3Q9BTC8 594 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 PIH1D3Q9NQM4 214 aaKnown RBP4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 DIAPH3Q9NSV4 1193 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 ATF5Q9Y2D1 282 aaPredicted RBP4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 U3KPZ7 1027 aaPredicted RBP4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 LTBP3Q9NS15 1303 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 MED23Q9ULK4 1368 aa4.89□□□□□ -1.63
HCG2040054-201ENST00000435331 BTAF1O14981 1849 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 C6orf229H3BNL8 230 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 ZBTB7AO95365 584 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 FGAP02671 866 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 VIL1P09327 827 aaKnown RBP4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 HMGB1P09429 215 aaKnown RBP4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 HSPD1P10809 573 aaKnown RBP4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 PCP11498 1178 aaKnown RBP4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 PDE6AP16499 860 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 PSMA5P28066 241 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 GSTO1P78417 241 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 NMIQ13287 307 aaPredicted RBP4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 CCDC93Q567U6 631 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 RNF20Q5VTR2 975 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 TTLL5Q6EMB2 1281 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 POTEHQ6S545 545 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 ERICH6Q7L0X2 663 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 EDC3Q96F86 508 aaKnown RBP4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 FAM227BQ96M60 508 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 FSD1Q9BTV5 496 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 PUS7LQ9H0K6 701 aaKnown RBP4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 ZSWIM6Q9HCJ5 1215 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 ATP8A2Q9NTI2 1148 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 LRP2BPQ9P2M1 347 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 MKRN1Q9UHC7 482 aaKnown RBP4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 LAMB4A4D0S4 1761 aa4.88□□□□□ -1.63
HCG2040054-201ENST00000435331 COL5A3P25940 1745 aaPredicted RBP4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 USP17L3A6NCW0 530 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 USP17L4A6NCW7 530 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 C21orf2O43822 256 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 UFL1O94874 794 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 BAG3O95817 575 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 PDIA4P13667 645 aaKnown RBP4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 ZKSCAN1P17029 563 aaPredicted RBP4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 MCCP23508 829 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 EVCP57679 992 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 EXOSC10Q01780 885 aaKnown RBP4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 PTH1RQ03431 593 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 KRT32Q14532 448 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 RABEP1Q15276 862 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 SBK1Q52WX2 424 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 USP17L1Q7RTZ2 530 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 MTMR14Q8NCE2 650 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 ZNF384Q8TF68 577 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 DPF2Q92785 391 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 DDRGK1Q96HY6 314 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 IPO9Q96P70 1041 aaKnown RBP4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 GMLQ99445 158 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 DNAJC2Q99543 621 aaKnown RBP4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 RIOK1Q9BRS2 568 aaKnown RBP4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 SYT17Q9BSW7 474 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 IL25Q9H293 177 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 ANAPC4Q9UJX5 808 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 ZNRF3Q9ULT6 936 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 SBF2Q86WG5 1849 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 ZMYM6O95789 1325 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 ZNF532Q9HCE3 1301 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 ZNF609O15014 1411 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 C10orf71Q711Q0 1435 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 SNED1Q8TER0 1413 aa4.87□□□□□ -1.63
HCG2040054-201ENST00000435331 A0A0D9SFI3 127 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 GSG1L2A8MUP6 293 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 FZD9O00144 591 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 SLC27A2O14975 620 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 FOXP2O15409 715 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 FRAT2O75474 233 aaPredicted RBP4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 IDH1O75874 414 aaKnown RBP4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 LDHBP07195 334 aaKnown RBP4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 PLCG2P16885 1265 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 CYP7A1P22680 504 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 KLRK1P26718 216 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 MECOMQ03112 1051 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 DACT2Q5SW24 774 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 VPS53Q5VIR6 699 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 FKBP1CQ5VVH2 108 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 CREB3L3Q68CJ9 461 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 NAA16Q6N069 864 aaPredicted RBP4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 PI16Q6UXB8 463 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 RASEFQ8IZ41 740 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 IFNL3Q8IZI9 196 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 TMTC2Q8N394 836 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 MAGEB6Q8N7X4 407 aa4.86□□□□□ -1.63
HCG2040054-201ENST00000435331 RGS22Q8NE09 1264 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms