RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 MB21D2Q8IYB1 491 aaPredicted RBP29.17■■■□□ 2.26
LMBR1-209ENST00000434453 GOLGA6L6A8MZA4 724 aa29.17■■■□□ 2.26
LMBR1-209ENST00000434453 IMMTQ16891 758 aaKnown RBP29.17■■■□□ 2.26
LMBR1-209ENST00000434453 LRRFIP1Q32MZ4 808 aaKnown RBP29.17■■■□□ 2.26
LMBR1-209ENST00000434453 ENGASEQ8NFI3 743 aa29.17■■■□□ 2.26
LMBR1-209ENST00000434453 ABCC12Q96J65 1359 aa29.17■■■□□ 2.26
LMBR1-209ENST00000434453 MAP3K15Q6ZN16 1313 aa29.16■■■□□ 2.26
LMBR1-209ENST00000434453 PRKCSHP14314 528 aaPredicted RBP29.16■■■□□ 2.26
LMBR1-209ENST00000434453 ZNF75DP51815 510 aa29.16■■■□□ 2.26
LMBR1-209ENST00000434453 ANTXR2P58335 489 aa29.16■■■□□ 2.26
LMBR1-209ENST00000434453 TAF7LQ5H9L4 462 aa29.16■■■□□ 2.26
LMBR1-209ENST00000434453 GIGYF2Q6Y7W6 1299 aaKnown RBP29.16■■■□□ 2.26
LMBR1-209ENST00000434453 HPS5Q9UPZ3 1129 aa29.16■■■□□ 2.26
LMBR1-209ENST00000434453 MCAMP43121 646 aa29.15■■■□□ 2.26
LMBR1-209ENST00000434453 PRIMPOLQ96LW4 560 aa29.15■■■□□ 2.26
LMBR1-209ENST00000434453 TEX13AQ9BXU3 409 aaPredicted RBP29.15■■■□□ 2.26
LMBR1-209ENST00000434453 IQCB1Q15051 598 aa29.14■■■□□ 2.26
LMBR1-209ENST00000434453 TTLL11Q8NHH1 800 aa29.14■■■□□ 2.26
LMBR1-209ENST00000434453 ZNF396Q96N95 335 aaPredicted RBP29.14■■■□□ 2.26
LMBR1-209ENST00000434453 GREM2Q9H772 168 aa29.14■■■□□ 2.26
LMBR1-209ENST00000434453 ANKRD36CQ5JPF3 1778 aa29.14■■■□□ 2.26
LMBR1-209ENST00000434453 CDHR2Q9BYE9 1310 aa29.14■■■□□ 2.26
LMBR1-209ENST00000434453 PRC1O43663 620 aa29.14■■■□□ 2.26
LMBR1-209ENST00000434453 ATP2B3Q16720 1220 aa29.14■■■□□ 2.26
LMBR1-209ENST00000434453 C11orf57Q6ZUT1 292 aaPredicted RBP29.14■■■□□ 2.26
LMBR1-209ENST00000434453 NRBP1Q9UHY1 535 aa29.14■■■□□ 2.26
LMBR1-209ENST00000434453 GPAA1O43292 621 aa29.13■■■□□ 2.25
LMBR1-209ENST00000434453 GPTP24298 496 aa29.13■■■□□ 2.25
LMBR1-209ENST00000434453 NLRP10Q86W26 655 aa29.13■■■□□ 2.25
LMBR1-209ENST00000434453 STRCQ7RTU9 1775 aa29.13■■■□□ 2.25
LMBR1-209ENST00000434453 ITGA6P23229 1130 aa29.13■■■□□ 2.25
LMBR1-209ENST00000434453 OTUD7BQ6GQQ9 843 aa29.13■■■□□ 2.25
LMBR1-209ENST00000434453 TRIM5Q9C035 493 aa29.13■■■□□ 2.25
LMBR1-209ENST00000434453 KAT6BQ8WYB5 2073 aa29.13■■■□□ 2.25
LMBR1-209ENST00000434453 STARD3NLO95772 234 aa29.12■■■□□ 2.25
LMBR1-209ENST00000434453 METTL24Q5JXM2 366 aa29.12■■■□□ 2.25
LMBR1-209ENST00000434453 CCDC186Q7Z3E2 898 aa29.12■■■□□ 2.25
LMBR1-209ENST00000434453 SLC4A9Q96Q91 983 aa29.12■■■□□ 2.25
LMBR1-209ENST00000434453 NBPF3Q9H094 633 aa29.12■■■□□ 2.25
LMBR1-209ENST00000434453 CAVIN2O95810 425 aa29.12■■■□□ 2.25
LMBR1-209ENST00000434453 VGLL2Q8N8G2 317 aa29.12■■■□□ 2.25
LMBR1-209ENST00000434453 NUP98P52948 1817 aa29.11■■■□□ 2.25
LMBR1-209ENST00000434453 LRP6O75581 1613 aa29.11■■■□□ 2.25
LMBR1-209ENST00000434453 C4AP0C0L4 1744 aa29.11■■■□□ 2.25
LMBR1-209ENST00000434453 C4BP0C0L5 1744 aa29.11■■■□□ 2.25
LMBR1-209ENST00000434453 CTAGE5O15320 804 aa29.11■■■□□ 2.25
LMBR1-209ENST00000434453 FAM160A1Q05DH4 1040 aa29.11■■■□□ 2.25
LMBR1-209ENST00000434453 KLF18A0A0U1RQI7 1052 aa29.1■■■□□ 2.25
LMBR1-209ENST00000434453 LDHAL6AQ6ZMR3 332 aa29.1■■■□□ 2.25
LMBR1-209ENST00000434453 CHMP4CQ96CF2 233 aa29.1■■■□□ 2.25
LMBR1-209ENST00000434453 LRMPQ12912 555 aa29.1■■■□□ 2.25
LMBR1-209ENST00000434453 CCDC73Q6ZRK6 1079 aa29.1■■■□□ 2.25
LMBR1-209ENST00000434453 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.1■■■□□ 2.25
LMBR1-209ENST00000434453 NKX2-3Q8TAU0 364 aa29.1■■■□□ 2.25
LMBR1-209ENST00000434453 RTEL1Q9NZ71 1219 aa29.1■■■□□ 2.25
LMBR1-209ENST00000434453 PCDHA7Q9UN72 937 aa29.1■■■□□ 2.25
LMBR1-209ENST00000434453 ME1P48163 572 aa29.09■■■□□ 2.25
LMBR1-209ENST00000434453 CTSWP56202 376 aa29.09■■■□□ 2.25
LMBR1-209ENST00000434453 NCOA7Q8NI08 942 aa29.09■■■□□ 2.25
LMBR1-209ENST00000434453 DENND2AQ9ULE3 1009 aa29.09■■■□□ 2.25
LMBR1-209ENST00000434453 KDM4FA0A1W2PPD8 638 aa29.09■■■□□ 2.25
LMBR1-209ENST00000434453 GOLGA8BA8MQT2 603 aa29.09■■■□□ 2.25
LMBR1-209ENST00000434453 GTF2F1P35269 517 aaKnown RBP eCLIP29.09■■■□□ 2.251e-6■□□□□ 8.3
LMBR1-209ENST00000434453 RAB11FIP4Q86YS3 637 aa29.09■■■□□ 2.25
LMBR1-209ENST00000434453 FSIP1Q8NA03 581 aa29.09■■■□□ 2.25
LMBR1-209ENST00000434453 A0A087WWV3 80 aa29.08■■■□□ 2.25
LMBR1-209ENST00000434453 ADD2P35612 726 aa29.08■■■□□ 2.25
LMBR1-209ENST00000434453 STX1AQ16623 288 aa29.08■■■□□ 2.25
LMBR1-209ENST00000434453 GJB4Q9NTQ9 266 aa29.08■■■□□ 2.25
LMBR1-209ENST00000434453 ATRNO75882 1429 aa29.07■■■□□ 2.24
LMBR1-209ENST00000434453 ZNF335Q9H4Z2 1342 aaPredicted RBP29.07■■■□□ 2.24
LMBR1-209ENST00000434453 ZNF213O14771 459 aa29.07■■■□□ 2.24
LMBR1-209ENST00000434453 FMR1NBQ8N0W7 255 aaPredicted RBP29.07■■■□□ 2.24
LMBR1-209ENST00000434453 FBXO18Q8NFZ0 1043 aa29.07■■■□□ 2.24
LMBR1-209ENST00000434453 ZNF512BQ96KM6 892 aaPredicted RBP29.07■■■□□ 2.24
LMBR1-209ENST00000434453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.06■■■□□ 2.24
LMBR1-209ENST00000434453 KINO60870 393 aaKnown RBP29.06■■■□□ 2.24
LMBR1-209ENST00000434453 CYP19A1P11511 503 aaPredicted RBP29.06■■■□□ 2.24
LMBR1-209ENST00000434453 LINC00301Q8NCQ3 95 aa29.06■■■□□ 2.24
LMBR1-209ENST00000434453 ORC3Q9UBD5 711 aaPredicted RBP29.06■■■□□ 2.24
LMBR1-209ENST00000434453 CLIC4Q9Y696 253 aa29.06■■■□□ 2.24
LMBR1-209ENST00000434453 NHSL1Q5SYE7 1610 aa29.06■■■□□ 2.24
LMBR1-209ENST00000434453 WDR19Q8NEZ3 1342 aa29.06■■■□□ 2.24
LMBR1-209ENST00000434453 ZSCAN25Q6NSZ9 544 aa29.06■■■□□ 2.24
LMBR1-209ENST00000434453 SARM1Q6SZW1 724 aa29.06■■■□□ 2.24
LMBR1-209ENST00000434453 TSC1Q92574 1164 aa29.06■■■□□ 2.24
LMBR1-209ENST00000434453 C8orf76Q96K31 380 aa29.06■■■□□ 2.24
LMBR1-209ENST00000434453 PIH1D3Q9NQM4 214 aaKnown RBP29.06■■■□□ 2.24
LMBR1-209ENST00000434453 DRC7Q8IY82 874 aa29.05■■■□□ 2.24
LMBR1-209ENST00000434453 BCL9O00512 1426 aa29.05■■■□□ 2.24
LMBR1-209ENST00000434453 ANKRD18BA2A2Z9 1011 aa29.05■■■□□ 2.24
LMBR1-209ENST00000434453 IRS4O14654 1257 aaPredicted RBP29.05■■■□□ 2.24
LMBR1-209ENST00000434453 CCDC144BQ3MJ40 725 aa29.05■■■□□ 2.24
LMBR1-209ENST00000434453 SLC9C2Q5TAH2 1124 aa29.05■■■□□ 2.24
LMBR1-209ENST00000434453 ADALQ6DHV7 355 aa29.05■■■□□ 2.24
LMBR1-209ENST00000434453 CCDC144CPQ8IYA2 1237 aa29.05■■■□□ 2.24
LMBR1-209ENST00000434453 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.05■■■□□ 2.241e-6■■□□□ 12.4
LMBR1-209ENST00000434453 POLR3DP05423 398 aaPredicted RBP29.04■■■□□ 2.24
LMBR1-209ENST00000434453 RALYLQ86SE5 291 aaKnown RBP29.04■■■□□ 2.24
LMBR1-209ENST00000434453 TBC1D10CQ8IV04 446 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms