RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TADA2BQ86TJ2 420 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 CARD10Q9BWT7 1032 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 NUTM2FA1L443 756 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 VWA3AA6NCI4 1184 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 NUTM2GQ5VZR2 741 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 EVI5LQ96CN4 794 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 JAKMIP1Q96N16 626 aaKnown RBP5.95□□□□□ -1.46
RIF1-203ENST00000428287 CARD6Q9BX69 1037 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 DEF6Q9H4E7 631 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 HPSEQ9Y251 543 aa5.95□□□□□ -1.46
RIF1-203ENST00000428287 A0A087WUV0 522 aaPredicted RBP5.94□□□□□ -1.46
RIF1-203ENST00000428287 CPA1P15085 419 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 RPS6KB1P23443 525 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 EIF5P55010 431 aaKnown RBP5.94□□□□□ -1.46
RIF1-203ENST00000428287 EIF4A2Q14240 407 aaKnown RBP5.94□□□□□ -1.46
RIF1-203ENST00000428287 LARP1Q6PKG0 1096 aaKnown RBP5.94□□□□□ -1.46
RIF1-203ENST00000428287 WDR24Q96S15 920 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 HEG1Q9ULI3 1381 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 UBR1Q8IWV7 1749 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 CUTAO60888 179 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 GORABQ5T7V8 394 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 USP28Q96RU2 1077 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 PDRG1Q9NUG6 133 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 ISM2Q6H9L7 571 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 SULT6B1Q6IMI4 303 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 ZNF592Q92610 1267 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 SPG7Q9UQ90 795 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 C5P01031 1676 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 COL15A1P39059 1388 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 WNK3Q9BYP7 1800 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 DNAH12Q6ZR08 3092 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 A6NNZ2 444 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 H3BQF6 201 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 GTF2A1P52655 376 aaPredicted RBP5.94□□□□□ -1.46
RIF1-203ENST00000428287 DDR1Q08345 913 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 CAMK4Q16566 473 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 TUBB8Q3ZCM7 444 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 SPATA20Q8TB22 786 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 SH3GL2Q99962 352 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 INTS13Q9NVM9 706 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 UTYO14607 1347 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 DNAJC21Q5F1R6 531 aaKnown RBP5.94□□□□□ -1.46
RIF1-203ENST00000428287 CXorf56Q9H5V9 222 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 HDAC5Q9UQL6 1122 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 IFIT2P09913 472 aaKnown RBP5.94□□□□□ -1.46
RIF1-203ENST00000428287 NOM1Q5C9Z4 860 aaKnown RBP5.94□□□□□ -1.46
RIF1-203ENST00000428287 FAM71BQ8TC56 605 aa5.94□□□□□ -1.46
RIF1-203ENST00000428287 TJP1Q07157 1748 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 MIA3Q5JRA6 1907 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 EVPLQ92817 2033 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 ARFGEF1Q9Y6D6 1849 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 IGSF1Q8N6C5 1336 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 ZSCAN12O43309 604 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 TAF5LO75529 589 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 SRGAP1Q7Z6B7 1085 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 NECAB1Q8N987 351 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 ZNF622Q969S3 477 aaKnown RBP eCLIP5.93□□□□□ -1.464e-7■■□□□ 12
RIF1-203ENST00000428287 STAG3Q9UJ98 1225 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 GGA2Q9UJY4 613 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 PTPRUQ92729 1446 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 SURF6O75683 361 aaKnown RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 SMC2O95347 1197 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 TNNT3P45378 269 aaPredicted RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 ZNF662Q6ZS27 426 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 APTXQ7Z2E3 356 aaKnown RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 ILDR1Q86SU0 546 aaPredicted RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 CCDC196A0A1B0GTZ2 297 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 GYS2P54840 703 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 NT5DC1Q5TFE4 455 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 CCDC30Q5VVM6 783 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 C1orf131Q8NDD1 294 aaKnown RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 BICD2Q8TD16 824 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 CDC23Q9UJX2 597 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 BCL9LQ86UU0 1499 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 CWC27Q6UX04 472 aaKnown RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 LINC00301Q8NCQ3 95 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 DDX11Q96FC9 970 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 IFNKQ9P0W0 207 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 EP400Q96L91 3159 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 MAP3K19Q56UN5 1328 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 POLR3GO15318 223 aaPredicted RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 PRPF38AQ8NAV1 312 aaKnown RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 KCNG4Q8TDN1 519 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 OVOS2A0A0G2JMS6 1433 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 KNL1Q8NG31 2342 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 APBB1O00213 710 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 SLC27A2O14975 620 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 TTC31Q49AM3 519 aaPredicted RBP5.93□□□□□ -1.46
RIF1-203ENST00000428287 HDXQ7Z353 690 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 CHMP4CQ96CF2 233 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 NUP188Q5SRE5 1749 aa5.93□□□□□ -1.46
RIF1-203ENST00000428287 PLEKHG3A1L390 1219 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 LRRC10BA6NIK2 292 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 CTDNEP1O95476 244 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 BMP6P22004 513 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 BRD2P25440 801 aaKnown RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 CCDC91Q7Z6B0 441 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 FOXP4Q8IVH2 680 aaPredicted RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 MYO1AQ9UBC5 1043 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 MINK1Q8N4C8 1332 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms