RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 YDJCA8MPS7 323 aa29.44■■■□□ 2.3
APOE-202ENST00000425718 ERC2O15083 957 aa29.44■■■□□ 2.3
APOE-202ENST00000425718 MMP14P50281 582 aa29.44■■■□□ 2.3
APOE-202ENST00000425718 ZGPATQ8N5A5 531 aaKnown RBP29.44■■■□□ 2.3
APOE-202ENST00000425718 WDR66Q8TBY9 1149 aa29.44■■■□□ 2.3
APOE-202ENST00000425718 LNPKQ9C0E8 428 aa29.44■■■□□ 2.3
APOE-202ENST00000425718 BCL11AQ9H165 835 aa29.44■■■□□ 2.3
APOE-202ENST00000425718 GPC2Q8N158 579 aa29.43■■■□□ 2.3
APOE-202ENST00000425718 ECHDC1Q9NTX5 307 aa29.43■■■□□ 2.3
APOE-202ENST00000425718 IGSF3O75054 1194 aa29.42■■■□□ 2.3
APOE-202ENST00000425718 RPS12P25398 132 aaKnown RBP29.42■■■□□ 2.3
APOE-202ENST00000425718 CXCL9Q07325 125 aa29.42■■■□□ 2.3
APOE-202ENST00000425718 TLR7Q9NYK1 1049 aaKnown RBP29.42■■■□□ 2.3
APOE-202ENST00000425718 VIL1P09327 827 aaKnown RBP29.41■■■□□ 2.3
APOE-202ENST00000425718 GTF2IP78347 998 aa29.41■■■□□ 2.3
APOE-202ENST00000425718 ZNF646O15015 1829 aaPredicted RBP29.41■■■□□ 2.3
APOE-202ENST00000425718 RAD17O75943 681 aa29.4■■■□□ 2.3
APOE-202ENST00000425718 ATP5JP18859 108 aa29.4■■■□□ 2.3
APOE-202ENST00000425718 MX1P20591 662 aa29.4■■■□□ 2.3
APOE-202ENST00000425718 AGBL3Q8NEM8 1001 aa29.4■■■□□ 2.3
APOE-202ENST00000425718 FBXW7Q969H0 707 aa29.4■■■□□ 2.3
APOE-202ENST00000425718 SUGT1Q9Y2Z0 365 aa29.4■■■□□ 2.3
APOE-202ENST00000425718 GLTPD2A6NH11 291 aa29.39■■■□□ 2.3
APOE-202ENST00000425718 SPATA5Q8NB90 893 aa29.39■■■□□ 2.3
APOE-202ENST00000425718 AOX1Q06278 1338 aa29.39■■■□□ 2.3
APOE-202ENST00000425718 PSMD14O00487 310 aa29.38■■■□□ 2.29
APOE-202ENST00000425718 RASGRF1Q13972 1273 aa29.38■■■□□ 2.29
APOE-202ENST00000425718 RSBN1LQ6PCB5 846 aaPredicted RBP29.38■■■□□ 2.29
APOE-202ENST00000425718 IQSEC3Q9UPP2 1182 aaPredicted RBP29.38■■■□□ 2.29
APOE-202ENST00000425718 SALL1Q9NSC2 1324 aa29.38■■■□□ 2.29
APOE-202ENST00000425718 SCN4AP35499 1836 aa29.37■■■□□ 2.29
APOE-202ENST00000425718 GLRX3O76003 335 aaKnown RBP29.37■■■□□ 2.29
APOE-202ENST00000425718 CHAF1AQ13111 956 aaPredicted RBP29.37■■■□□ 2.29
APOE-202ENST00000425718 DACT2Q5SW24 774 aa29.37■■■□□ 2.29
APOE-202ENST00000425718 SPTY2D1Q68D10 685 aaPredicted RBP29.37■■■□□ 2.29
APOE-202ENST00000425718 STAP2Q9UGK3 403 aa29.37■■■□□ 2.29
APOE-202ENST00000425718 ZNF541Q9H0D2 1346 aa29.37■■■□□ 2.29
APOE-202ENST00000425718 MCAMP43121 646 aa29.36■■■□□ 2.29
APOE-202ENST00000425718 TTF1Q15361 905 aaPredicted RBP29.36■■■□□ 2.29
APOE-202ENST00000425718 DPF2Q92785 391 aa29.36■■■□□ 2.29
APOE-202ENST00000425718 GJA3Q9Y6H8 435 aa29.36■■■□□ 2.29
APOE-202ENST00000425718 MAST3O60307 1309 aa29.36■■■□□ 2.29
APOE-202ENST00000425718 MFSD14BQ5SR56 506 aa29.35■■■□□ 2.29
APOE-202ENST00000425718 HMG20BQ9P0W2 317 aa29.35■■■□□ 2.29
APOE-202ENST00000425718 SALL3Q9BXA9 1300 aa29.35■■■□□ 2.29
APOE-202ENST00000425718 TMED8Q6PL24 325 aaPredicted RBP29.34■■■□□ 2.29
APOE-202ENST00000425718 OSBPL3Q9H4L5 887 aa29.34■■■□□ 2.29
APOE-202ENST00000425718 WDR90Q96KV7 1748 aa29.34■■■□□ 2.29
APOE-202ENST00000425718 LMOD1P29536 600 aaPredicted RBP29.33■■■□□ 2.29
APOE-202ENST00000425718 PDE1AP54750 535 aa29.33■■■□□ 2.29
APOE-202ENST00000425718 C16orf71Q8IYS4 520 aaPredicted RBP29.33■■■□□ 2.29
APOE-202ENST00000425718 L3MBTL3Q96JM7 780 aaPredicted RBP29.33■■■□□ 2.29
APOE-202ENST00000425718 KCNQ5Q9NR82 932 aa29.33■■■□□ 2.29
APOE-202ENST00000425718 HDAC9Q9UKV0 1011 aa29.33■■■□□ 2.29
APOE-202ENST00000425718 OGFOD1Q8N543 542 aa29.32■■■□□ 2.28
APOE-202ENST00000425718 HAUS7Q99871 368 aa29.32■■■□□ 2.28
APOE-202ENST00000425718 MYH7P12883 1935 aa29.32■■■□□ 2.28
APOE-202ENST00000425718 COL1A1P02452 1464 aaPredicted RBP29.31■■■□□ 2.28
APOE-202ENST00000425718 IQCA1LA6NCM1 817 aa29.31■■■□□ 2.28
APOE-202ENST00000425718 AK9Q5TCS8 1911 aa29.31■■■□□ 2.28
APOE-202ENST00000425718 DOCK2Q92608 1830 aa29.31■■■□□ 2.28
APOE-202ENST00000425718 DDNO94850 711 aaPredicted RBP29.3■■■□□ 2.28
APOE-202ENST00000425718 PLEKHM2Q8IWE5 1019 aa29.3■■■□□ 2.28
APOE-202ENST00000425718 SLF2Q8IX21 1173 aa29.3■■■□□ 2.28
APOE-202ENST00000425718 BOLA2Q9H3K6 86 aa29.3■■■□□ 2.28
APOE-202ENST00000425718 LDHBP07195 334 aaKnown RBP29.29■■■□□ 2.28
APOE-202ENST00000425718 SCARF1Q14162 830 aa29.29■■■□□ 2.28
APOE-202ENST00000425718 ERICH6Q7L0X2 663 aa29.29■■■□□ 2.28
APOE-202ENST00000425718 MAST2Q6P0Q8 1798 aa29.29■■■□□ 2.28
APOE-202ENST00000425718 H7C1D1 291 aa29.28■■■□□ 2.28
APOE-202ENST00000425718 ZAP70P43403 619 aa29.28■■■□□ 2.28
APOE-202ENST00000425718 GMPSP49915 693 aaPredicted RBP29.28■■■□□ 2.28
APOE-202ENST00000425718 LRRFIP1Q32MZ4 808 aaKnown RBP29.28■■■□□ 2.28
APOE-202ENST00000425718 OTUD7AQ8TE49 926 aaPredicted RBP29.28■■■□□ 2.28
APOE-202ENST00000425718 GMLQ99445 158 aa29.28■■■□□ 2.28
APOE-202ENST00000425718 DNAJC2Q99543 621 aaKnown RBP29.28■■■□□ 2.28
APOE-202ENST00000425718 PAG1Q9NWQ8 432 aa29.28■■■□□ 2.28
APOE-202ENST00000425718 ABCF2Q9UG63 623 aa29.28■■■□□ 2.28
APOE-202ENST00000425718 MYH2Q9UKX2 1941 aa29.28■■■□□ 2.28
APOE-202ENST00000425718 USP17L8P0C7I0 530 aa29.27■■■□□ 2.28
APOE-202ENST00000425718 HDLBPQ00341 1268 aaKnown RBP29.27■■■□□ 2.28
APOE-202ENST00000425718 PI4K2BQ8TCG2 481 aa29.27■■■□□ 2.28
APOE-202ENST00000425718 MRIQ9BWK5 157 aa29.27■■■□□ 2.28
APOE-202ENST00000425718 SNRKQ9NRH2 765 aa29.27■■■□□ 2.28
APOE-202ENST00000425718 LRP2BPQ9P2M1 347 aa29.27■■■□□ 2.28
APOE-202ENST00000425718 JAG2Q9Y219 1238 aa29.27■■■□□ 2.28
APOE-202ENST00000425718 MYO5AQ9Y4I1 1855 aaKnown RBP29.27■■■□□ 2.28
APOE-202ENST00000425718 TICAM2Q86XR7 235 aa29.26■■■□□ 2.27
APOE-202ENST00000425718 GPRC5DQ9NZD1 345 aa29.26■■■□□ 2.27
APOE-202ENST00000425718 CYP2E1P05181 493 aaPredicted RBP29.25■■■□□ 2.27
APOE-202ENST00000425718 GSTO1P78417 241 aa29.25■■■□□ 2.27
APOE-202ENST00000425718 MAP3K12Q12852 859 aa29.25■■■□□ 2.27
APOE-202ENST00000425718 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.25■■■□□ 2.27
APOE-202ENST00000425718 CNOT7Q9UIV1 285 aaKnown RBP29.25■■■□□ 2.27
APOE-202ENST00000425718 HACL1Q9UJ83 578 aa29.25■■■□□ 2.27
APOE-202ENST00000425718 TTF2Q9UNY4 1162 aaKnown RBP29.25■■■□□ 2.27
APOE-202ENST00000425718 ZBTB12Q9Y330 459 aaPredicted RBP29.25■■■□□ 2.27
APOE-202ENST00000425718 PI16Q6UXB8 463 aa29.24■■■□□ 2.27
APOE-202ENST00000425718 DZIP1Q86YF9 867 aaKnown RBP29.24■■■□□ 2.27
APOE-202ENST00000425718 KIAA0825Q8IV33 1275 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms