RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 TNFAIP1Q13829 316 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 LRRC24Q50LG9 513 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 CELF1Q92879 486 aaKnown RBP8.62□□□□□ -1.03
LSM8-204ENST00000424702 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 TBC1D2Q9BYX2 928 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 MINPP1Q9UNW1 487 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 KIF3AQ9Y496 699 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 ZBTB22O15209 634 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 GBP4Q96PP9 640 aa8.62□□□□□ -1.03
LSM8-204ENST00000424702 RNF41Q9H4P4 317 aaPredicted RBP8.62□□□□□ -1.03
LSM8-204ENST00000424702 CTDP1Q9Y5B0 961 aaPredicted RBP8.62□□□□□ -1.03
LSM8-204ENST00000424702 CRACR2BQ8N4Y2 399 aaPredicted RBP8.61□□□□□ -1.03
LSM8-204ENST00000424702 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.61□□□□□ -1.03
LSM8-204ENST00000424702 KAZALD1Q96I82 304 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 CLEC11AQ9Y240 323 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 POLR3DP05423 398 aaPredicted RBP8.61□□□□□ -1.03
LSM8-204ENST00000424702 IARSP41252 1262 aaKnown RBP8.61□□□□□ -1.03
LSM8-204ENST00000424702 KRT32Q14532 448 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 LRP10Q7Z4F1 713 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 DLGAP5Q15398 846 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 SPATA5Q8NB90 893 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 TEKT1Q969V4 418 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 PUS3Q9BZE2 481 aaKnown RBP8.61□□□□□ -1.03
LSM8-204ENST00000424702 SUGT1Q9Y2Z0 365 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 CYP46A1Q9Y6A2 500 aa8.61□□□□□ -1.03
LSM8-204ENST00000424702 TOGARAM1Q9Y4F4 1720 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 IQCA1LA6NCM1 817 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 ANAPC15P60006 121 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 NMIQ13287 307 aaPredicted RBP8.6□□□□□ -1.03
LSM8-204ENST00000424702 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 NAPBQ9H115 298 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 RNF181Q9P0P0 153 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 DBNLQ9UJU6 430 aaKnown RBP8.6□□□□□ -1.03
LSM8-204ENST00000424702 GTF2IP78347 998 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 U3KPZ7 1027 aaPredicted RBP8.6□□□□□ -1.03
LSM8-204ENST00000424702 NCLP19338 710 aaKnown RBP8.6□□□□□ -1.03
LSM8-204ENST00000424702 LMNB1P20700 586 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 IMMTQ16891 758 aaKnown RBP8.6□□□□□ -1.03
LSM8-204ENST00000424702 MFSD14BQ5SR56 506 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 CCDC102BQ68D86 513 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 TTLL5Q6EMB2 1281 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 PI4K2BQ8TCG2 481 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 JAKMIP1Q96N16 626 aaKnown RBP8.6□□□□□ -1.03
LSM8-204ENST00000424702 TLR7Q9NYK1 1049 aaKnown RBP8.6□□□□□ -1.03
LSM8-204ENST00000424702 BRWD3Q6RI45 1802 aa8.6□□□□□ -1.03
LSM8-204ENST00000424702 MAGEB6P1A0A0J9YX57 407 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 RNF113AO15541 343 aaKnown RBP8.59□□□□□ -1.03
LSM8-204ENST00000424702 SGSM2O43147 1006 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 CCDC178Q5BJE1 867 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 FHDC1Q9C0D6 1143 aaPredicted RBP8.59□□□□□ -1.03
LSM8-204ENST00000424702 ZNRF3Q9ULT6 936 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 IQSEC3Q9UPP2 1182 aaPredicted RBP8.59□□□□□ -1.03
LSM8-204ENST00000424702 PAPPAQ13219 1627 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 GPSM2P81274 684 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 UPF3BQ9BZI7 483 aaKnown RBP8.59□□□□□ -1.03
LSM8-204ENST00000424702 CICQ96RK0 1608 aaPredicted RBP8.59□□□□□ -1.03
LSM8-204ENST00000424702 MED23Q9ULK4 1368 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 RPS12P25398 132 aaKnown RBP8.59□□□□□ -1.03
LSM8-204ENST00000424702 MCMDC2Q4G0Z9 681 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 BLOC1S2Q6QNY1 142 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 SNX21Q969T3 373 aa8.59□□□□□ -1.03
LSM8-204ENST00000424702 EPB41L2O43491 1005 aaKnown RBP8.58□□□□□ -1.04
LSM8-204ENST00000424702 RFX5P48382 616 aaPredicted RBP8.58□□□□□ -1.04
LSM8-204ENST00000424702 CASP7P55210 303 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 TTLL12Q14166 644 aaPredicted RBP8.58□□□□□ -1.04
LSM8-204ENST00000424702 CRY2Q49AN0 593 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 KBTBD3Q8NAB2 608 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 TBC1D16Q8TBP0 767 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 GYG1P46976 350 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 NUCB2P80303 420 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 DOK7Q18PE1 504 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 SLC9C2Q5TAH2 1124 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 TTC6Q86TZ1 520 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 PSMD1Q99460 953 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 HELLSQ9NRZ9 838 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 RIPOR2Q9Y4F9 1068 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 F8W031 263 aaPredicted RBP8.58□□□□□ -1.04
LSM8-204ENST00000424702 CASTP20810 708 aaKnown RBP8.58□□□□□ -1.04
LSM8-204ENST00000424702 APPBP2Q92624 585 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 HAUS7Q99871 368 aa8.58□□□□□ -1.04
LSM8-204ENST00000424702 TTF2Q9UNY4 1162 aaKnown RBP8.58□□□□□ -1.04
LSM8-204ENST00000424702 SIPA1L3O60292 1781 aaPredicted RBP8.58□□□□□ -1.04
LSM8-204ENST00000424702 ECE2O60344 883 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 PTMSP20962 102 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 ANKRD1Q15327 319 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 CABP5Q9NP86 173 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 PDRG1Q9NUG6 133 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 RBM8AQ9Y5S9 174 aaKnown RBP8.57□□□□□ -1.04
LSM8-204ENST00000424702 ZNF831Q5JPB2 1677 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 AKAP17AQ02040 695 aaKnown RBP8.57□□□□□ -1.04
LSM8-204ENST00000424702 PDE4BQ07343 736 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 TEX11Q8IYF3 940 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 CD209Q9NNX6 404 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 PODXL2Q9NZ53 605 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 HMG20BQ9P0W2 317 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms