RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.36
SH3PXD2A-204ENST00000420222 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.36
SH3PXD2A-204ENST00000420222 ADALQ6DHV7 355 aa17.27■□□□□ 0.36
SH3PXD2A-204ENST00000420222 WDR24Q96S15 920 aa17.27■□□□□ 0.36
SH3PXD2A-204ENST00000420222 KLF18A0A0U1RQI7 1052 aa17.27■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CASQ1P31415 396 aa17.27■□□□□ 0.35
SH3PXD2A-204ENST00000420222 SMC1AQ14683 1233 aaKnown RBP17.27■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.35
SH3PXD2A-204ENST00000420222 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TSPOAP1O95153 1857 aa17.27■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ADGRL3Q9HAR2 1447 aa17.26■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TRIM66O15016 1216 aa17.26■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CPLX3Q8WVH0 158 aa17.26■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CLIC6Q96NY7 704 aa17.26■□□□□ 0.35
SH3PXD2A-204ENST00000420222 IRX2Q9BZI1 471 aaPredicted RBP17.26■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
SH3PXD2A-204ENST00000420222 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 FDPSP14324 419 aaKnown RBP17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 NLRP12P59046 1061 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CCDC93Q567U6 631 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 FANCLQ9NW38 375 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ATP5JP18859 108 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 SYKP43405 635 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 USPL1Q5W0Q7 1092 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CREBRFQ8IUR6 639 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 LLPHQ9BRT6 129 aaKnown RBP17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 LZTFL1Q9NQ48 299 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 NEURL1BA8MQ27 555 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PHACTR2O75167 634 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ZNF827Q17R98 1081 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CCDC12Q8WUD4 166 aaPredicted RBP17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 FAM53CQ9NYF3 392 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 EID1Q9Y6B2 187 aa17.25■□□□□ 0.35
SH3PXD2A-204ENST00000420222 A0A087WZG4 1122 aa17.24■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TADA3O75528 432 aa17.24■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PPP2R3AQ06190 1150 aa17.24■□□□□ 0.35
SH3PXD2A-204ENST00000420222 GCKRQ14397 625 aa17.24■□□□□ 0.35
SH3PXD2A-204ENST00000420222 AKAP4Q5JQC9 854 aa17.24■□□□□ 0.35
SH3PXD2A-204ENST00000420222 MROH7-TTC4A0A0A0MT08 1334 aa17.24■□□□□ 0.35
SH3PXD2A-204ENST00000420222 GPS2Q13227 327 aa17.24■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TSGA10IPQ3SY00 556 aa17.24■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ANKRD65E5RJM6 399 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 NCAPHQ15003 741 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ZSCAN26Q16670 478 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 MYSM1Q5VVJ2 828 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 LMBR1LQ6UX01 489 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ARFGAP3Q9NP61 516 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PAG1Q9NWQ8 432 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ZNF330Q9Y3S2 320 aaPredicted RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 HOXB7P09629 217 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 WWC2Q6AWC2 1192 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TOGARAM2Q6ZUX3 1019 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 KCNG4Q8TDN1 519 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ZNF594Q96JF6 807 aaPredicted RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 LCMT1Q9UIC8 334 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PPP2R2CQ9Y2T4 447 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 HMGB1P09429 215 aaKnown RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PTPN12Q05209 780 aaKnown RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 LRRFIP1Q32MZ4 808 aaKnown RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TRIM65Q6PJ69 517 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 OLFM4Q6UX06 510 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 RTEL1Q9NZ71 1219 aa17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 FEZ2Q9UHY8 353 aaPredicted RBP17.23■□□□□ 0.35
SH3PXD2A-204ENST00000420222 WDHD1O75717 1129 aaPredicted RBP17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 KBTBD3Q8NAB2 608 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CEMIPQ8WUJ3 1361 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TNRQ92752 1358 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 FOXN1O15353 648 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TFRCP02786 760 aaKnown RBP17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CC2D1AQ6P1N0 951 aaPredicted RBP17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 DHX58Q96C10 678 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 VPS18Q9P253 973 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 RSPH14Q9UHP6 348 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ZRANB2O95218 330 aaKnown RBP eCLIP17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PSME1Q06323 249 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PARD6BQ9BYG5 372 aa17.22■□□□□ 0.35
SH3PXD2A-204ENST00000420222 MYL5Q02045 173 aa17.21■□□□□ 0.35
SH3PXD2A-204ENST00000420222 MTF1Q14872 753 aa17.21■□□□□ 0.35
SH3PXD2A-204ENST00000420222 TXLNBQ8N3L3 684 aa17.21■□□□□ 0.35
SH3PXD2A-204ENST00000420222 CCDC82Q8N4S0 544 aa17.21■□□□□ 0.35
SH3PXD2A-204ENST00000420222 PHKBQ93100 1093 aa17.21■□□□□ 0.35
SH3PXD2A-204ENST00000420222 BAG1Q99933 345 aaPredicted RBP17.21■□□□□ 0.35
SH3PXD2A-204ENST00000420222 VWA3AA6NCI4 1184 aa17.2■□□□□ 0.34
SH3PXD2A-204ENST00000420222 EFCAB8A8MWE9 144 aa17.2■□□□□ 0.34
SH3PXD2A-204ENST00000420222 ZSCAN12O43309 604 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms