RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 INF2Q27J81 1249 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 PLEKHA4Q9H4M7 779 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 XRCC6P12956 609 aaKnown RBP eCLIP20.84■□□□□ 0.93
SHANK3-202ENST00000414786 RHOXF2BP0C7M4 288 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 MCM5P33992 734 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 RHOXF2Q9BQY4 288 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 GOLGA6L9A6NEM1 432 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 CCDC77Q9BR77 488 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 TBC1D7Q9P0N9 293 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 DBF4Q9UBU7 674 aaPredicted RBP20.84■□□□□ 0.93
SHANK3-202ENST00000414786 MYOM3Q5VTT5 1437 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 HMGB2P26583 209 aaKnown RBP20.84■□□□□ 0.93
SHANK3-202ENST00000414786 LZTFL1Q9NQ48 299 aa20.84■□□□□ 0.93
SHANK3-202ENST00000414786 B4DLN1 442 aa20.83■□□□□ 0.93
SHANK3-202ENST00000414786 MRPL12P52815 198 aaKnown RBP20.83■□□□□ 0.93
SHANK3-202ENST00000414786 SH2B1Q9NRF2 756 aaPredicted RBP20.83■□□□□ 0.93
SHANK3-202ENST00000414786 TRPC3Q13507 836 aa20.83■□□□□ 0.93
SHANK3-202ENST00000414786 IFNL2Q8IZJ0 200 aa20.83■□□□□ 0.92
SHANK3-202ENST00000414786 DCLK2Q8N568 766 aa20.83■□□□□ 0.92
SHANK3-202ENST00000414786 SSH1Q8WYL5 1049 aa20.83■□□□□ 0.92
SHANK3-202ENST00000414786 ITKQ08881 620 aa20.83■□□□□ 0.92
SHANK3-202ENST00000414786 DNAI1Q9UI46 699 aa20.83■□□□□ 0.92
SHANK3-202ENST00000414786 Q6ZUG5 572 aa20.83■□□□□ 0.92
SHANK3-202ENST00000414786 RMND1Q9NWS8 449 aa20.83■□□□□ 0.92
SHANK3-202ENST00000414786 FRMD4BQ9Y2L6 1034 aa20.83■□□□□ 0.92
SHANK3-202ENST00000414786 GOLGA6CA6NDK9 693 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 GOLGA6BA6NDN3 693 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 GOLGA6DP0CG33 693 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 ZNF165P49910 485 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 AOPEPQ8N6M6 819 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 GOLGA6AQ9NYA3 693 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 GIPC1O14908 333 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 ESR2Q92731 530 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 CHPF2Q9P2E5 772 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
SHANK3-202ENST00000414786 CCDC61Q9Y6R9 512 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 SLC8A3P57103 927 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 SESTD1Q86VW0 696 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 CYLC1P35663 651 aaPredicted RBP20.82■□□□□ 0.92
SHANK3-202ENST00000414786 NEK11Q8NG66 645 aa20.82■□□□□ 0.92
SHANK3-202ENST00000414786 AQRO60306 1485 aaKnown RBP eCLIP20.82■□□□□ 0.929e-7■■■■■ 27.1
SHANK3-202ENST00000414786 MAPK8IP1Q9UQF2 711 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 ANO6Q4KMQ2 910 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 CCDC110Q8TBZ0 833 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 PARD3BQ8TEW8 1205 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 WDR44Q5JSH3 913 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 MED10Q9BTT4 135 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 STX10O60499 249 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 CNPY2Q9Y2B0 182 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 SEPT6Q14141 434 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 METTL13Q8N6R0 699 aa20.81■□□□□ 0.92
SHANK3-202ENST00000414786 WDR46O15213 610 aaKnown RBP20.8■□□□□ 0.92
SHANK3-202ENST00000414786 CTAGE5O15320 804 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 MICALL1Q8N3F8 863 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 RFC1P35251 1148 aaPredicted RBP20.8■□□□□ 0.92
SHANK3-202ENST00000414786 TRIM31Q9BZY9 425 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 SARNPP82979 210 aaKnown RBP20.8■□□□□ 0.92
SHANK3-202ENST00000414786 TMTC4Q5T4D3 741 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 DZIP3Q86Y13 1208 aaKnown RBP20.8■□□□□ 0.92
SHANK3-202ENST00000414786 MSANTD4Q8NCY6 345 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 KIAA1524Q8TCG1 905 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 CEP85LQ5SZL2 805 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 FAM184BQ9ULE4 1060 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 ATP2A2P16615 1042 aaKnown RBP20.8■□□□□ 0.92
SHANK3-202ENST00000414786 CCT6AP40227 531 aaKnown RBP20.8■□□□□ 0.92
SHANK3-202ENST00000414786 LETM2Q2VYF4 491 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 KRT79Q5XKE5 535 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 XAGE3Q8WTP9 111 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 C20orf194Q5TEA3 1177 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 CCDC129Q6ZRS4 1044 aa20.8■□□□□ 0.92
SHANK3-202ENST00000414786 PA2G4Q9UQ80 394 aaKnown RBP20.8■□□□□ 0.92
SHANK3-202ENST00000414786 FNDC3AQ9Y2H6 1198 aaKnown RBP20.8■□□□□ 0.92
SHANK3-202ENST00000414786 GNPATO15228 680 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 DDB1Q16531 1140 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 KRT23Q9C075 422 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 RRP9O43818 475 aaKnown RBP20.79■□□□□ 0.92
SHANK3-202ENST00000414786 ITIH3Q06033 890 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 HS2ST1Q7LGA3 356 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 SYNJ2BP-COX16A0A087WUM0 186 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 SPDYE2BA6NHP3 402 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 SPDYE6P0CI01 402 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 FBXO31Q5XUX0 539 aaPredicted RBP20.79■□□□□ 0.92
SHANK3-202ENST00000414786 ANKRD13DQ6ZTN6 518 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 COX16Q9P0S2 106 aa20.79■□□□□ 0.92
SHANK3-202ENST00000414786 KIF2AO00139 706 aaPredicted RBP20.78■□□□□ 0.92
SHANK3-202ENST00000414786 HPDP32754 393 aaPredicted RBP20.78■□□□□ 0.92
SHANK3-202ENST00000414786 CPLX4Q7Z7G2 160 aa20.78■□□□□ 0.92
SHANK3-202ENST00000414786 KANK3Q6NY19 840 aa20.78■□□□□ 0.92
SHANK3-202ENST00000414786 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.78■□□□□ 0.92
SHANK3-202ENST00000414786 TAB3Q8N5C8 712 aaPredicted RBP20.78■□□□□ 0.92
SHANK3-202ENST00000414786 VIMP08670 466 aaKnown RBP20.78■□□□□ 0.92
SHANK3-202ENST00000414786 HCLS1P14317 486 aaPredicted RBP20.78■□□□□ 0.92
SHANK3-202ENST00000414786 CCDC122Q5T0U0 273 aa20.78■□□□□ 0.92
SHANK3-202ENST00000414786 CEP120Q8N960 986 aa20.78■□□□□ 0.92
SHANK3-202ENST00000414786 ZCRB1Q8TBF4 217 aaKnown RBP20.78■□□□□ 0.92
SHANK3-202ENST00000414786 ECHDC1Q9NTX5 307 aa20.78■□□□□ 0.92
SHANK3-202ENST00000414786 SLC4A1P02730 911 aa20.78■□□□□ 0.92
SHANK3-202ENST00000414786 SAT1P21673 171 aa20.78■□□□□ 0.92
SHANK3-202ENST00000414786 ZNF174Q15697 407 aa20.78■□□□□ 0.92
SHANK3-202ENST00000414786 COPS6Q7L5N1 327 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms