RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 USP17L1Q7RTZ2 530 aa9.56□□□□□ -0.88
CPSF4-202ENST00000412686 SAMD7Q7Z3H4 446 aa9.56□□□□□ -0.88
CPSF4-202ENST00000412686 ZNF804AQ7Z570 1209 aa9.56□□□□□ -0.88
CPSF4-202ENST00000412686 FBXO33Q7Z6M2 555 aa9.56□□□□□ -0.88
CPSF4-202ENST00000412686 MICALL2Q8IY33 904 aa9.56□□□□□ -0.88
CPSF4-202ENST00000412686 CERS5Q8N5B7 392 aa9.56□□□□□ -0.88
CPSF4-202ENST00000412686 TRPM4Q8TD43 1214 aa9.56□□□□□ -0.88
CPSF4-202ENST00000412686 LPIN2Q92539 896 aa9.56□□□□□ -0.88
CPSF4-202ENST00000412686 CNOT7Q9UIV1 285 aaKnown RBP9.56□□□□□ -0.88
CPSF4-202ENST00000412686 IQCA1LA6NCM1 817 aa9.55□□□□□ -0.88
CPSF4-202ENST00000412686 APBB1O00213 710 aa9.55□□□□□ -0.88
CPSF4-202ENST00000412686 PHKA1P46020 1223 aa9.55□□□□□ -0.88
CPSF4-202ENST00000412686 CHAF1AQ13111 956 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-202ENST00000412686 OS9Q13438 667 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-202ENST00000412686 GRIK5Q16478 980 aa9.55□□□□□ -0.88
CPSF4-202ENST00000412686 RBM26Q5T8P6 1007 aaKnown RBP9.55□□□□□ -0.88
CPSF4-202ENST00000412686 TTLL5Q6EMB2 1281 aa9.55□□□□□ -0.88
CPSF4-202ENST00000412686 RPAP2Q8IXW5 612 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-202ENST00000412686 C16orf71Q8IYS4 520 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-202ENST00000412686 TDRD7Q8NHU6 1098 aaKnown RBP9.55□□□□□ -0.88
CPSF4-202ENST00000412686 GMLQ99445 158 aa9.55□□□□□ -0.88
CPSF4-202ENST00000412686 NOP58Q9Y2X3 529 aaKnown RBP9.55□□□□□ -0.88
CPSF4-202ENST00000412686 PCDHB15Q9Y5E8 787 aa9.55□□□□□ -0.88
CPSF4-202ENST00000412686 F8W031 263 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-202ENST00000412686 TOMM70O94826 608 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 HIRAP54198 1017 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-202ENST00000412686 C1QTNF8P60827 252 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 TBC1D10BQ4KMP7 808 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-202ENST00000412686 CAVIN4Q5BKX8 364 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 STRIP1Q5VSL9 837 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 VPS37DQ86XT2 251 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 KIAA0825Q8IV33 1275 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 EXOC6Q8TAG9 804 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 XAGE2Q96GT9 111 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 NEUROD6Q96NK8 337 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 BCL11AQ9H165 835 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
CPSF4-202ENST00000412686 ADARB2Q9NS39 739 aaKnown RBP9.54□□□□□ -0.88
CPSF4-202ENST00000412686 CLEC11AQ9Y240 323 aa9.54□□□□□ -0.88
CPSF4-202ENST00000412686 ASTN2O75129 1339 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-202ENST00000412686 TNNI3KQ59H18 835 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 MAP1SQ66K74 1059 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-202ENST00000412686 CCDC102BQ68D86 513 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 AGBL3Q8NEM8 1001 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 RBM46Q8TBY0 533 aaKnown RBP9.53□□□□□ -0.88
CPSF4-202ENST00000412686 DPF2Q92785 391 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 DBNDD2Q9BQY9 259 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 IL1RAPL2Q9NP60 686 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 TLR7Q9NYK1 1049 aaKnown RBP9.53□□□□□ -0.88
CPSF4-202ENST00000412686 PCDHAC2Q9Y5I4 1007 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 FPGT-TNNI3KV9GXZ4 949 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 FAM205AQ6ZU69 1335 aa9.53□□□□□ -0.88
CPSF4-202ENST00000412686 H7C1D1 291 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 HMMRO75330 724 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 FRAT2O75474 233 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-202ENST00000412686 USP17L8P0C7I0 530 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 RPS12P25398 132 aaKnown RBP9.52□□□□□ -0.89
CPSF4-202ENST00000412686 ZNF280AP59817 542 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-202ENST00000412686 FMR1Q06787 632 aaKnown RBP eCLIP9.52□□□□□ -0.89
CPSF4-202ENST00000412686 SCARF1Q14162 830 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 KIF4BQ2VIQ3 1234 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 MFSD14BQ5SR56 506 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 LDHDQ86WU2 507 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 RHPN1Q8TCX5 695 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 EAF2Q96CJ1 260 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-202ENST00000412686 CCDC8Q9H0W5 538 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-202ENST00000412686 DBNLQ9UJU6 430 aaKnown RBP9.52□□□□□ -0.89
CPSF4-202ENST00000412686 SCAF8Q9UPN6 1271 aaKnown RBP9.52□□□□□ -0.89
CPSF4-202ENST00000412686 AKAP2Q9Y2D5 859 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 AOX1Q06278 1338 aa9.52□□□□□ -0.89
CPSF4-202ENST00000412686 SMARCA5O60264 1052 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-202ENST00000412686 RASGRF1Q13972 1273 aa9.51□□□□□ -0.89
CPSF4-202ENST00000412686 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
CPSF4-202ENST00000412686 PI16Q6UXB8 463 aa9.51□□□□□ -0.89
CPSF4-202ENST00000412686 DLK2Q6UY11 383 aa9.51□□□□□ -0.89
CPSF4-202ENST00000412686 USP50Q70EL3 339 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-202ENST00000412686 PNMA8AQ86V59 439 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-202ENST00000412686 SMC1BQ8NDV3 1235 aa9.51□□□□□ -0.89
CPSF4-202ENST00000412686 MYOZ2Q9NPC6 264 aa9.51□□□□□ -0.89
CPSF4-202ENST00000412686 MYO3BQ8WXR4 1341 aa9.51□□□□□ -0.89
CPSF4-202ENST00000412686 NBPF9Q3BBW0 867 aa9.5□□□□□ -0.89
CPSF4-202ENST00000412686 AACSQ86V21 672 aa9.5□□□□□ -0.89
CPSF4-202ENST00000412686 ERC1Q8IUD2 1116 aa9.5□□□□□ -0.89
CPSF4-202ENST00000412686 GPR108Q9NPR9 543 aa9.5□□□□□ -0.89
CPSF4-202ENST00000412686 TTF2Q9UNY4 1162 aaKnown RBP9.5□□□□□ -0.89
CPSF4-202ENST00000412686 AKAP11Q9UKA4 1901 aa9.5□□□□□ -0.89
CPSF4-202ENST00000412686 POLR2AP24928 1970 aaKnown RBP9.5□□□□□ -0.89
CPSF4-202ENST00000412686 MYO5AQ9Y4I1 1855 aaKnown RBP9.49□□□□□ -0.89
CPSF4-202ENST00000412686 TRAF5O00463 557 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 ITGBL1O95965 494 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-202ENST00000412686 PRDX5P30044 214 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 MCAMP43121 646 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 FKBP1AP62942 108 aaKnown RBP9.49□□□□□ -0.89
CPSF4-202ENST00000412686 HTRA3P83110 453 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 GORABQ5T7V8 394 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 CNTROBQ8N137 903 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 KIF1BPQ96EK5 621 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 GLIS2Q9BZE0 524 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-202ENST00000412686 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 GGA3Q9NZ52 723 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 567.2 ms