RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 ADH6P28332 368 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 AGMOQ6ZNB7 445 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 HFE2Q6ZVN8 426 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 FAM35AQ86V20 835 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 MCF2L2Q86YR7 1114 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 POP1Q99575 1024 aaKnown RBP6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 CLEC4MQ9H2X3 399 aaPredicted RBP6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 IGFLR1Q9H665 355 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 FRRS1LQ9P0K9 344 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 SLC6A14Q9UN76 642 aa6.25□□□□□ -1.41
RNU2-28P-201ENST00000410457 MINDY4BA8MYZ0 360 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 PTPRAP18433 802 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 GTF2F1P35269 517 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 ADH7P40394 386 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 PCBP4P57723 403 aaKnown RBP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 LMNB2Q03252 620 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 RBL2Q08999 1139 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 FAAP100Q0VG06 881 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 COL9A2Q14055 689 aaPredicted RBP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 CEP135Q66GS9 1140 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 NPAS3Q8IXF0 933 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 ZNF296Q8WUU4 475 aaPredicted RBP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 DHX38Q92620 1227 aaKnown RBP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 PLD4Q96BZ4 506 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 HIRIP3Q9BW71 556 aaPredicted RBP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 NT5C1AQ9BXI3 368 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 MUC3BQ9H195 1237 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 SOX13Q9UN79 622 aa6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 NSFL1CQ9UNZ2 370 aaKnown RBP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 SUPT16HQ9Y5B9 1047 aaKnown RBP6.24□□□□□ -1.41
RNU2-28P-201ENST00000410457 GREM1O60565 184 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 B3GALT4O96024 378 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 GARTP22102 1010 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 MAP2K3P46734 347 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 PPP2R3AQ06190 1150 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 TBC1D8BQ0IIM8 1120 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 GAS6Q14393 721 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 PERM1Q5SV97 790 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 SOGA3Q5TF21 947 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 TTBK2Q6IQ55 1244 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 FBXL19Q6PCT2 694 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 CCDC84Q86UT8 332 aaPredicted RBP6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 CACTIN-AS1Q8N1I8 211 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 MICALL1Q8N3F8 863 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 SLC16A10Q8TF71 515 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 TTC9Q92623 222 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 DNAJC2Q99543 621 aaKnown RBP6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 ADAM19Q9H013 955 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 GPN3Q9UHW5 284 aaPredicted RBP6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 KLF15Q9UIH9 416 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 NAGPAQ9UK23 515 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 SAMM50Q9Y512 469 aa6.23□□□□□ -1.41
RNU2-28P-201ENST00000410457 PF4P02776 101 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 CPB1P15086 417 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 SOX9P48436 509 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 PCDH1Q08174 1060 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 CAMK2GQ13555 558 aaPredicted RBP6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 PCNX4Q63HM2 1172 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 ELMSAN1Q6PJG2 1045 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 DPH6Q7L8W6 267 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 VN1R5Q7Z5H4 357 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 TRIM42Q8IWZ5 723 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 EAF1Q96JC9 268 aaPredicted RBP6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 LPIN3Q9BQK8 851 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 MBIPQ9NS73 344 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 STRIP2Q9ULQ0 834 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 TLR6Q9Y2C9 796 aa6.22□□□□□ -1.41
RNU2-28P-201ENST00000410457 ROBO2Q9HCK4 1378 aa6.21□□□□□ -1.41
RNU2-28P-201ENST00000410457 ELOA3CA0A087WX78 387 aaPredicted RBP6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 ELOA3DA6NLF2 546 aaPredicted RBP6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 F6X3S4 739 aa6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 PAGE1O75459 146 aa6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 STK10O94804 968 aaKnown RBP6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 TFE3P19532 575 aaPredicted RBP6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 ELOA3BQ3SY89 546 aa6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 SNAP47Q5SQN1 464 aa6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 SCARA3Q6AZY7 606 aa6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 FCHSD1Q86WN1 690 aa6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 ELOA3Q8NG57 546 aa6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 SMG9Q9H0W8 520 aaKnown RBP6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 NXF1Q9UBU9 619 aaKnown RBP6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 CYP8B1Q9UNU6 501 aa6.21□□□□□ -1.42
RNU2-28P-201ENST00000410457 FAM177BA6PVY3 158 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 EIF4EBP3O60516 100 aaPredicted RBP6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 VSIG8P0DPA2 414 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 NME2P22392 152 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 KCNMA1Q12791 1236 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 ZNF423Q2M1K9 1284 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 FAM196AQ6ZSG2 479 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 GOLM1Q8NBJ4 401 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 LRRC3Q9BY71 257 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 LNPKQ9C0E8 428 aa6.2□□□□□ -1.42
RNU2-28P-201ENST00000410457 NEURL1BA8MQ27 555 aa6.19□□□□□ -1.42
RNU2-28P-201ENST00000410457 ESRRAP11474 423 aaPredicted RBP6.19□□□□□ -1.42
RNU2-28P-201ENST00000410457 BMP6P22004 513 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms