RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 C15orf52Q6ZUT6 534 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-208ENST00000409531 AACSQ86V21 672 aa20.26■□□□□ 0.83
TSPAN4-208ENST00000409531 LNPKQ9C0E8 428 aa20.26■□□□□ 0.83
TSPAN4-208ENST00000409531 ZBTB12Q9Y330 459 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-208ENST00000409531 RPS12P25398 132 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 USP50Q70EL3 339 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 EAF2Q96CJ1 260 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 NEUROD6Q96NK8 337 aa20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 ADARB2Q9NS39 739 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 CNOT7Q9UIV1 285 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 CLEC11AQ9Y240 323 aa20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-208ENST00000409531 H7C1D1 291 aa20.24■□□□□ 0.83
TSPAN4-208ENST00000409531 KLRK1P26718 216 aa20.24■□□□□ 0.83
TSPAN4-208ENST00000409531 TIMM10P62072 90 aa20.24■□□□□ 0.83
TSPAN4-208ENST00000409531 USP17L3A6NCW0 530 aa20.23■□□□□ 0.83
TSPAN4-208ENST00000409531 USP17L4A6NCW7 530 aa20.23■□□□□ 0.83
TSPAN4-208ENST00000409531 GORABQ5T7V8 394 aa20.23■□□□□ 0.83
TSPAN4-208ENST00000409531 USP17L1Q7RTZ2 530 aa20.23■□□□□ 0.83
TSPAN4-208ENST00000409531 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
TSPAN4-208ENST00000409531 CAVIN4Q5BKX8 364 aa20.22■□□□□ 0.83
TSPAN4-208ENST00000409531 XAGE2Q96GT9 111 aa20.22■□□□□ 0.83
TSPAN4-208ENST00000409531 CCDC8Q9H0W5 538 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-208ENST00000409531 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
TSPAN4-208ENST00000409531 IRS2Q9Y4H2 1338 aa20.21■□□□□ 0.83
TSPAN4-208ENST00000409531 RSBN1LQ6PCB5 846 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-208ENST00000409531 MICALL2Q8IY33 904 aa20.21■□□□□ 0.83
TSPAN4-208ENST00000409531 AGBL3Q8NEM8 1001 aa20.21■□□□□ 0.83
TSPAN4-208ENST00000409531 CCDC158Q5M9N0 1113 aa20.2■□□□□ 0.82
TSPAN4-208ENST00000409531 STRIP1Q5VSL9 837 aa20.2■□□□□ 0.82
TSPAN4-208ENST00000409531 VPS37DQ86XT2 251 aa20.2■□□□□ 0.82
TSPAN4-208ENST00000409531 DBNLQ9UJU6 430 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-208ENST00000409531 MYH13Q9UKX3 1938 aa20.2■□□□□ 0.82
TSPAN4-208ENST00000409531 MX1P20591 662 aa20.19■□□□□ 0.82
TSPAN4-208ENST00000409531 TTLL5Q6EMB2 1281 aa20.19■□□□□ 0.82
TSPAN4-208ENST00000409531 ZNF804AQ7Z570 1209 aa20.19■□□□□ 0.82
TSPAN4-208ENST00000409531 CNTROBQ8N137 903 aa20.19■□□□□ 0.82
TSPAN4-208ENST00000409531 DBNDD2Q9BQY9 259 aa20.19■□□□□ 0.82
TSPAN4-208ENST00000409531 TTC41PQ6P2S7 1318 aa20.19■□□□□ 0.82
TSPAN4-208ENST00000409531 SCN9AQ15858 1988 aa20.18■□□□□ 0.82
TSPAN4-208ENST00000409531 SHTN1A0MZ66 631 aa20.18■□□□□ 0.82
TSPAN4-208ENST00000409531 ITGBL1O95965 494 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-208ENST00000409531 DACT2Q5SW24 774 aa20.18■□□□□ 0.82
TSPAN4-208ENST00000409531 KLRG1Q96E93 195 aa20.18■□□□□ 0.82
TSPAN4-208ENST00000409531 GMLQ99445 158 aa20.18■□□□□ 0.82
TSPAN4-208ENST00000409531 GNL3LQ9NVN8 582 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-208ENST00000409531 IL1R1P14778 569 aa20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 ADORA1P30542 326 aa20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 HIBADHP31937 336 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 HIRAP54198 1017 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 GTF2IP78347 998 aa20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 MAP1SQ66K74 1059 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 SAMD7Q7Z3H4 446 aa20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 ZC3H15Q8WU90 426 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 ECHDC1Q9NTX5 307 aa20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 TLR7Q9NYK1 1049 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 PGAP2Q9UHJ9 254 aa20.17■□□□□ 0.82
TSPAN4-208ENST00000409531 ERC2O15083 957 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 USP17L8P0C7I0 530 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 UQCRFS1P1P0C7P4 283 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 CCDC102BQ68D86 513 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 FBXO33Q7Z6M2 555 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 FBXW7Q969H0 707 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 FAM84BQ96KN1 310 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 STAP2Q9UGK3 403 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 AOX1Q06278 1338 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 SALL3Q9BXA9 1300 aa20.16■□□□□ 0.82
TSPAN4-208ENST00000409531 PDE4AP27815 886 aa20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 GYG1P46976 350 aa20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 PDE1AP54750 535 aa20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 ZNF280AP59817 542 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 RBM26Q5T8P6 1007 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 PLEKHM2Q8IWE5 1019 aa20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 TRPM4Q8TD43 1214 aa20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 ZNF512BQ96KM6 892 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 OSBPL3Q9H4L5 887 aa20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 MYO3BQ8WXR4 1341 aa20.15■□□□□ 0.82
TSPAN4-208ENST00000409531 ZBTB22O15209 634 aa20.14■□□□□ 0.81
TSPAN4-208ENST00000409531 BCAMP50895 628 aa20.14■□□□□ 0.81
TSPAN4-208ENST00000409531 TBC1D10BQ4KMP7 808 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-208ENST00000409531 JMYQ8N9B5 988 aa20.14■□□□□ 0.81
TSPAN4-208ENST00000409531 TDRD7Q8NHU6 1098 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-208ENST00000409531 OTUD7AQ8TE49 926 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-208ENST00000409531 MXD3Q9BW11 206 aa20.14■□□□□ 0.81
TSPAN4-208ENST00000409531 PASKQ96RG2 1323 aa20.14■□□□□ 0.81
TSPAN4-208ENST00000409531 ADAMTSL1Q8N6G6 1762 aa20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 SEMA3EO15041 775 aa20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 GLRX3O76003 335 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 ATP5JP18859 108 aa20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 ARID4AP29374 1257 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 PHKA1P46020 1223 aa20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 MMP14P50281 582 aa20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 TNS4Q8IZW8 715 aa20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 OGFOD1Q8N543 542 aa20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 AKAP11Q9UKA4 1901 aa20.13■□□□□ 0.81
TSPAN4-208ENST00000409531 FRAT2O75474 233 aaPredicted RBP20.12■□□□□ 0.81
TSPAN4-208ENST00000409531 EGFRP00533 1210 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms