RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
CCDC85A-201ENST00000407595 KIAA1210Q9ULL0 1709 aa18.19■□□□□ 0.5
CCDC85A-201ENST00000407595 HSP90AA4PQ58FG1 418 aa18.19■□□□□ 0.5
CCDC85A-201ENST00000407595 OTUD7BQ6GQQ9 843 aa18.19■□□□□ 0.5
CCDC85A-201ENST00000407595 RPGRQ92834 1020 aaKnown RBP18.19■□□□□ 0.5
CCDC85A-201ENST00000407595 RGS12O14924 1447 aa18.19■□□□□ 0.5
CCDC85A-201ENST00000407595 SIGLEC1Q9BZZ2 1709 aa18.19■□□□□ 0.5
CCDC85A-201ENST00000407595 C1orf167Q5SNV9 1468 aa18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 SPATA31D1Q6ZQQ2 1576 aa18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 NAA30Q147X3 362 aaPredicted RBP18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 HLFQ16534 295 aa18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 TMEM67Q5HYA8 995 aa18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 TFCP2L1Q9NZI6 479 aa18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 RNF113AO15541 343 aaKnown RBP18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 KIF20AO95235 890 aa18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
CCDC85A-201ENST00000407595 A0A087WWV3 80 aa18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 JAK2O60674 1132 aa18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 LEO1Q8WVC0 666 aaPredicted RBP18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 SLC4A4Q9Y6R1 1079 aa18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 ZNF589Q86UQ0 364 aaPredicted RBP18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 TPCN1Q9ULQ1 816 aa18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 ARHGEF28Q8N1W1 1705 aaKnown RBP18.17■□□□□ 0.5
CCDC85A-201ENST00000407595 NR1I2O75469 434 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 PRDM1O75626 825 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 NEMFO60524 1076 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 CCDC34Q96HJ3 373 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 USP21Q9UK80 565 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 LOC102724428A0A0B4J2F2 783 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 NBPF26B4DH59 902 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 SIK1P57059 783 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 PTPN12Q05209 780 aaKnown RBP18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 ELF2Q15723 593 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 NBPF14Q5TI25 921 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 NBPF10Q6P3W6 841 aaKnown RBP18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 NBPF15Q8N660 670 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 SEC31BQ9NQW1 1179 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 DNAI1Q9UI46 699 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 SLC12A7Q9Y666 1083 aa18.16■□□□□ 0.5
CCDC85A-201ENST00000407595 GOLGA8AA7E2F4 631 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 CTAGE5O15320 804 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 PRC1O43663 620 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 SLU7O95391 586 aaKnown RBP18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 SYT10Q6XYQ8 523 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 KBTBD3Q8NAB2 608 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 ZSWIM4Q9H7M6 989 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 MKNK2Q9HBH9 465 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 CEP170BQ9Y4F5 1589 aaPredicted RBP18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 TAF3Q5VWG9 929 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 MYL10Q9BUA6 226 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 LSG1Q9H089 658 aaKnown RBP18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 DLC1Q96QB1 1528 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 KCNQ2O43526 872 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 LMOD1P29536 600 aaPredicted RBP18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 NCOA7Q8NI08 942 aa18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
CCDC85A-201ENST00000407595 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 MBD4O95243 580 aa18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 SLC26A6Q9BXS9 759 aa18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 ZNF215Q9UL58 517 aaPredicted RBP18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 DIP2AQ14689 1571 aa18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 KIF2AO00139 706 aaPredicted RBP18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 SLC3A2P08195 630 aaKnown RBP18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 ZNF397Q8NF99 534 aaPredicted RBP18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 ARMT1Q9H993 441 aa18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 HMG20BQ9P0W2 317 aa18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 STAP2Q9UGK3 403 aa18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 MRVI1Q9Y6F6 885 aa18.14■□□□□ 0.49
CCDC85A-201ENST00000407595 ADCY9O60503 1353 aa18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 B4E1Z4 1266 aa18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 GPAA1O43292 621 aa18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 PDE8AO60658 829 aa18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 BMS1Q14692 1282 aaKnown RBP18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 MFSD6Q6ZSS7 791 aa18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 TECPR2O15040 1411 aa18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 IL25Q9H293 177 aa18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 CLSTN2Q9H4D0 955 aa18.13■□□□□ 0.49
CCDC85A-201ENST00000407595 RIMBP2O15034 1052 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 XBP1P17861 261 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 CRKLP46109 303 aaKnown RBP18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 CACTINQ8WUQ7 758 aaKnown RBP18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 ZSCAN16Q9H4T2 348 aaPredicted RBP18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 VAT1LQ9HCJ6 419 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 GSDMDP57764 484 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 A0A1B0GVL5 298 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 METAP2P50579 478 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 TPTE2Q6XPS3 522 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 IFNKQ9P0W0 207 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 STX8Q9UNK0 236 aa18.12■□□□□ 0.49
CCDC85A-201ENST00000407595 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
CCDC85A-201ENST00000407595 CAVIN2O95810 425 aa18.11■□□□□ 0.49
CCDC85A-201ENST00000407595 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
CCDC85A-201ENST00000407595 BCAMP50895 628 aa18.11■□□□□ 0.49
CCDC85A-201ENST00000407595 TTF1Q15361 905 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms