RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 GSDMDP57764 484 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 HAUS3Q68CZ6 603 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 LMBR1Q8WVP7 490 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 FAM81BQ96LP2 452 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 PFDN4Q9NQP4 134 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 RRP1P56182 461 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 GTF3C2Q8WUA4 911 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 HAUS1Q96CS2 278 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 MTIF3Q9H2K0 278 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 SYNCQ9H7C4 482 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 THRAP3Q9Y2W1 955 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 MYO3BQ8WXR4 1341 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 hCG_1984214I3L0E3 225 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 POLR3DP05423 398 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 DDB1Q16531 1140 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 RBM42Q9BTD8 480 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 CIZ1Q9ULV3 898 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 SLC8A2Q9UPR5 921 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 OVOS2A0A0G2JMS6 1433 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 VPS37CA5D8V6 355 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 DNM2P50570 870 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 ATP2B2Q01814 1243 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 PPP2R5EQ16537 467 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 ARHGAP29Q52LW3 1261 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 SDCCAG8Q86SQ7 713 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 ZNF444Q8N0Y2 327 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 ZNF830Q96NB3 372 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 CARD10Q9BWT7 1032 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 NSRP1Q9H0G5 558 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 DDX5P17844 614 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 PPARGP37231 505 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 PATL1Q86TB9 770 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 CDK19Q9BWU1 502 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.09□□□□□ -1.91
CHD9-202ENST00000398510 UTP6Q9NYH9 597 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 MADDQ8WXG6 1647 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 AKAP11Q9UKA4 1901 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 ARHGEF28Q8N1W1 1705 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 ZNF638Q14966 1978 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 MYH7BA7E2Y1 1941 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 DLG5Q8TDM6 1919 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 HOXB7P09629 217 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 MFSD6Q6ZSS7 791 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 PODNQ7Z5L7 613 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 NSMCE1Q8WV22 266 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 TRIM62Q9BVG3 475 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 CWC25Q9NXE8 425 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 TTC41PQ6P2S7 1318 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 EIF3CLB5ME19 914 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 DEKP35659 375 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 EIF3CQ99613 913 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 CCDC87Q9NVE4 849 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 EXOC7Q9UPT5 735 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 ZNF142P52746 1687 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 ANKRD36CQ5JPF3 1778 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 KIF5CO60282 957 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 PSMA4P25789 261 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 TTLL7Q6ZT98 887 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 NUDT18Q6ZVK8 323 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 NOL8Q76FK4 1167 aaKnown RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 TANGO6Q9C0B7 1094 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 TMEM51Q9NW97 253 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 FEZ2Q9UHY8 353 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 ZHX1Q9UKY1 873 aaPredicted RBP3.09□□□□□ -1.91
CHD9-202ENST00000398510 PNMA3Q9UL41 463 aa3.09□□□□□ -1.91
CHD9-202ENST00000398510 IPO5O00410 1097 aaKnown RBP3.09□□□□□ -1.92
CHD9-202ENST00000398510 RPL13P26373 211 aaKnown RBP3.09□□□□□ -1.92
CHD9-202ENST00000398510 SPAG1Q07617 926 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 GSE1Q14687 1217 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 TSPYL2Q9H2G4 693 aaPredicted RBP3.09□□□□□ -1.92
CHD9-202ENST00000398510 DCCP43146 1447 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 SPEF2Q9C093 1822 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 MYH15Q9Y2K3 1946 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 RIOK3O14730 519 aaKnown RBP3.09□□□□□ -1.92
CHD9-202ENST00000398510 GBP1P32455 592 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 ME1P48163 572 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 SFSWAPQ12872 951 aaKnown RBP3.09□□□□□ -1.92
CHD9-202ENST00000398510 CCDC6Q16204 474 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 GNPTABQ3T906 1256 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 METTL24Q5JXM2 366 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 SERPINC1P01008 464 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 PTGDRQ13258 359 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 CCAR2Q8N163 923 aaKnown RBP3.09□□□□□ -1.92
CHD9-202ENST00000398510 ATP2A3Q93084 1043 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 ZNF215Q9UL58 517 aaPredicted RBP3.09□□□□□ -1.92
CHD9-202ENST00000398510 NOD1Q9Y239 953 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 C3P01024 1663 aa3.09□□□□□ -1.92
CHD9-202ENST00000398510 UBAP1LF5GYI3 381 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 SCP2P22307 547 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 POLR2BP30876 1174 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 PRPF38AQ8NAV1 312 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 DTNBP1Q96EV8 351 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 NLRP3Q96P20 1036 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 TCHPQ9BT92 498 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 SAMM50Q9Y512 469 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 CSADQ9Y600 493 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 APBB1O00213 710 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 SMARCA5O60264 1052 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 USP14P54578 494 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 CKAP4Q07065 602 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms