RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TLR6Q9Y2C9 796 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 PCDHGA11Q9Y5H2 935 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 B2RBV5 119 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 JUNDP17535 347 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 RASA3Q14644 834 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 SLC9A5Q14940 896 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 PTPRNQ16849 979 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 PERM1Q5SV97 790 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 ICE2Q659A1 982 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 SPATC1Q76KD6 591 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 BTN2A1Q7KYR7 527 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 TRIM56Q9BRZ2 755 aaKnown RBP4.29□□□□□ -1.72
XRN1-202ENST00000392981 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.29□□□□□ -1.72
XRN1-202ENST00000392981 SERTM1A2A2V5 107 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 L1CAMP32004 1257 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 LMNB2Q03252 620 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 DDR2Q16832 855 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 SV2CQ496J9 727 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 SUGP1Q8IWZ8 645 aaKnown RBP4.29□□□□□ -1.72
XRN1-202ENST00000392981 TRIM22Q8IYM9 498 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 ZSWIM2Q8NEG5 633 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 ATRIPQ8WXE1 791 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 RUNDC1Q96C34 613 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 CEP63Q96MT8 703 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 IRAK4Q9NWZ3 460 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 UBAP1LF5GYI3 381 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 DIAPH1O60610 1272 aaKnown RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 IL33O95760 270 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 NEUROD1Q13562 356 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 THAP3Q8WTV1 239 aaPredicted RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 JPH3Q8WXH2 748 aaPredicted RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 DCBLD2Q96PD2 775 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 FAM126AQ9BYI3 521 aaPredicted RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 TMX1Q9H3N1 280 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 RAPGEF3O95398 923 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 PYGMP11217 842 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 COPS2P61201 443 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 PUM3Q15397 648 aaKnown RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 CHCHD4Q8N4Q1 142 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 PPHLN1Q8NEY8 458 aaKnown RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 TTC8Q8TAM2 541 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 APBA2Q99767 749 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 PLAAQ9Y263 795 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 FNDC3AQ9Y2H6 1198 aaKnown RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 NEK2P51955 445 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 C6orf15Q6UXA7 325 aaPredicted RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 MORC1Q86VD1 984 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 TTC13Q8NBP0 860 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 TRIM11Q96F44 468 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 OSBPL7Q9BZF2 842 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 PICK1Q9NRD5 415 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 ADAMTS1Q9UHI8 967 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 DMTF1Q9Y222 760 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 KAT6BQ8WYB5 2073 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 AKAP10O43572 662 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 AGR2O95994 175 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 GSTT1P30711 240 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 TMCO3Q6UWJ1 677 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 TPH2Q8IWU9 490 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 LTV1Q96GA3 475 aaPredicted RBP4.28□□□□□ -1.72
XRN1-202ENST00000392981 JADE2Q9NQC1 790 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 SCINQ9Y6U3 715 aa4.28□□□□□ -1.72
XRN1-202ENST00000392981 FRMPD2Q68DX3 1309 aaPredicted RBP4.28□□□□□ -1.73
XRN1-202ENST00000392981 MEN1O00255 615 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 TIMM44O43615 452 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 PF4P02776 101 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 HSP90AB1P08238 724 aaKnown RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 HALP42357 657 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 CCDC92Q53HC0 331 aaPredicted RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 RRP12Q5JTH9 1297 aaKnown RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 CASC1Q6TDU7 716 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 TTC30BQ8N4P2 665 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 ARL10Q8N8L6 244 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 ARHGEF10LQ9HCE6 1279 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 FYB1O15117 783 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 VARSP26640 1264 aaKnown RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 KRT20P35900 424 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 FXR2P51116 673 aaKnown RBP eCLIP4.27□□□□□ -1.73
XRN1-202ENST00000392981 IL2P60568 153 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 ELF2Q15723 593 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 ESCO1Q5FWF5 840 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 TMEM214Q6NUQ4 689 aaKnown RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 CLIP3Q96DZ5 547 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 SENP7Q9BQF6 1050 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 ANKIB1Q9P2G1 1089 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 NDOR1Q9UHB4 597 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 LHX6Q9UPM6 363 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 SQSTM1Q13501 440 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 CWF19L2Q2TBE0 894 aaKnown RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 PNMA5Q96PV4 448 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 MAGED2Q9UNF1 606 aaPredicted RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 GPSM3Q9Y4H4 160 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 HIP1RO75146 1068 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 GJB6O95452 261 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 PPP4CP60510 307 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 CBX2Q14781 532 aaPredicted RBP4.27□□□□□ -1.73
XRN1-202ENST00000392981 TAF12Q16514 161 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 ABCB5Q2M3G0 1257 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 ASAP3Q8TDY4 903 aa4.27□□□□□ -1.73
XRN1-202ENST00000392981 COG1Q8WTW3 980 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms