RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 DNAJC25Q9H1X3 360 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 GJB2P29033 226 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 PTPN12Q05209 780 aaKnown RBP21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 NEK1Q96PY6 1258 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 SEC62Q99442 399 aaKnown RBP21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 COPRSQ9NQ92 184 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 PARP10Q53GL7 1025 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 SAMD1Q6SPF0 538 aaPredicted RBP21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 ZNF710Q8N1W2 664 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 CCDC102AQ96A19 550 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 BRD1O95696 1058 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 IL6STP40189 918 aaPredicted RBP21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 DACT1Q9NYF0 836 aa21.82■■□□□ 1.08
PPFIA1-202ENST00000389547 PCCAP05165 728 aaPredicted RBP21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 NAA30Q147X3 362 aaPredicted RBP21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 KIAA1524Q8TCG1 905 aa21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 BRF1Q92994 677 aa21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 ZNF215Q9UL58 517 aaPredicted RBP21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 PALD1Q9ULE6 856 aa21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 GUCY1B3Q02153 619 aa21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 USPL1Q5W0Q7 1092 aa21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 CEP57L1Q8IYX8 460 aa21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 CTSWP56202 376 aa21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 MIGA1Q8NAN2 632 aa21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 ZSCAN31Q96LW9 406 aaPredicted RBP21.81■■□□□ 1.08
PPFIA1-202ENST00000389547 DCCP43146 1447 aa21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 TRIM37O94972 964 aa21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 IRX5P78411 483 aaPredicted RBP21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 POLA2Q14181 598 aa21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 CREB3L3Q68CJ9 461 aa21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 DZIP1Q86YF9 867 aaKnown RBP21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 ZNF622Q969S3 477 aaKnown RBP eCLIP21.8■■□□□ 1.081e-6■■□□□ 13.5
PPFIA1-202ENST00000389547 NLRP10Q86W26 655 aa21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 ACBD3Q9H3P7 528 aa21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 SHPRHQ149N8 1683 aa21.8■■□□□ 1.08
PPFIA1-202ENST00000389547 PDIA6Q15084 440 aa21.79■■□□□ 1.08
PPFIA1-202ENST00000389547 NEMFO60524 1076 aa21.79■■□□□ 1.08
PPFIA1-202ENST00000389547 UQCRFS1P1P0C7P4 283 aa21.79■■□□□ 1.08
PPFIA1-202ENST00000389547 CCDC34Q96HJ3 373 aa21.79■■□□□ 1.08
PPFIA1-202ENST00000389547 F13A1P00488 732 aa21.79■■□□□ 1.08
PPFIA1-202ENST00000389547 RBM5P52756 815 aaKnown RBP eCLIP21.79■■□□□ 1.08
PPFIA1-202ENST00000389547 TRPC5Q9UL62 973 aaPredicted RBP21.79■■□□□ 1.08
PPFIA1-202ENST00000389547 CCP110O43303 1012 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 ZAP70P43403 619 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 SEPT12Q8IYM1 358 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 MARCH10Q8NA82 808 aaPredicted RBP21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 SEC31BQ9NQW1 1179 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 ME1P48163 572 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 TTF1Q15361 905 aaPredicted RBP21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 NEK11Q8NG66 645 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 ERO1AQ96HE7 468 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 SNAP23O00161 211 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 ADORA1P30542 326 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 AK2P54819 239 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 A0A0D9SFI3 127 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 CCDC144CPQ8IYA2 1237 aa21.78■■□□□ 1.08
PPFIA1-202ENST00000389547 PALLDQ8WX93 1383 aa21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 RNF113AO15541 343 aaKnown RBP21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 CYP7A1P22680 504 aa21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 TERF2Q15554 542 aa21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 RASSF8Q8NHQ8 419 aa21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 SERPINC1P01008 464 aa21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 NCBP1Q09161 790 aaKnown RBP21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 NOC3LQ8WTT2 800 aaKnown RBP21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 UBAC1Q9BSL1 405 aa21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 SCAND2PQ9GZW5 306 aaPredicted RBP21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 STAP2Q9UGK3 403 aa21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 SRP68Q9UHB9 627 aaKnown RBP21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 DNAI1Q9UI46 699 aa21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 RGPD8O14715 1765 aaPredicted RBP21.77■■□□□ 1.08
PPFIA1-202ENST00000389547 ANAPC15P60006 121 aa21.77■■□□□ 1.07
PPFIA1-202ENST00000389547 PTH1RQ03431 593 aa21.77■■□□□ 1.07
PPFIA1-202ENST00000389547 CNBD1Q8NA66 436 aa21.77■■□□□ 1.07
PPFIA1-202ENST00000389547 INTS4Q96HW7 963 aaKnown RBP21.77■■□□□ 1.07
PPFIA1-202ENST00000389547 NYXQ9GZU5 481 aa21.77■■□□□ 1.07
PPFIA1-202ENST00000389547 ZSWIM4Q9H7M6 989 aa21.77■■□□□ 1.07
PPFIA1-202ENST00000389547 AFF2P51816 1311 aa21.77■■□□□ 1.07
PPFIA1-202ENST00000389547 NCOA3Q9Y6Q9 1424 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 CYP19A1P11511 503 aaPredicted RBP21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 DDX19AQ9NUU7 478 aaKnown RBP21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 SYT1P21579 422 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 ATP2B2Q01814 1243 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 FAM196AQ6ZSG2 479 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 CPDO75976 1380 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 CCDC69A6NI79 296 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 HSPA1LP34931 641 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 SYT10Q6XYQ8 523 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 MAGEB6Q8N7X4 407 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 KBTBD3Q8NAB2 608 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 OSBPL3Q9H4L5 887 aa21.76■■□□□ 1.07
PPFIA1-202ENST00000389547 RANBP6O60518 1105 aaKnown RBP21.75■■□□□ 1.07
PPFIA1-202ENST00000389547 ATP5JP18859 108 aa21.75■■□□□ 1.07
PPFIA1-202ENST00000389547 THRAP3Q9Y2W1 955 aaKnown RBP21.75■■□□□ 1.07
PPFIA1-202ENST00000389547 ADGRB2O60241 1585 aa21.75■■□□□ 1.07
PPFIA1-202ENST00000389547 H7C1W4 665 aa21.75■■□□□ 1.07
PPFIA1-202ENST00000389547 EIF3JO75822 258 aaKnown RBP21.75■■□□□ 1.07
PPFIA1-202ENST00000389547 ST5P78524 1137 aa21.75■■□□□ 1.07
PPFIA1-202ENST00000389547 PI16Q6UXB8 463 aa21.75■■□□□ 1.07
PPFIA1-202ENST00000389547 APBA3O96018 575 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms