RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 GSTO1P78417 241 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 SPAG1Q07617 926 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 HS2ST1Q7LGA3 356 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 ARHGAP5Q13017 1502 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 SPDYE3A6NKU9 549 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 CETN3O15182 167 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 KCNG4Q8TDN1 519 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 VCXQ9H320 206 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 SMIM24O75264 130 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 CAVIN2O95810 425 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 THEMISQ8N1K5 641 aaPredicted RBP6.59□□□□□ -1.35
RFX3-204ENST00000382004 CCDC26Q8TAB7 109 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 BIN2Q9UBW5 565 aaPredicted RBP6.59□□□□□ -1.35
RFX3-204ENST00000382004 SPOPO43791 374 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 CYP7A1P22680 504 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 FRMD4BQ9Y2L6 1034 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 MAN1A1P33908 653 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 SEPT8Q92599 483 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 TSPYL2Q9H2G4 693 aaPredicted RBP6.59□□□□□ -1.35
RFX3-204ENST00000382004 SUDS3Q9H7L9 328 aaPredicted RBP6.59□□□□□ -1.35
RFX3-204ENST00000382004 IQSEC3Q9UPP2 1182 aaPredicted RBP6.59□□□□□ -1.35
RFX3-204ENST00000382004 SLC4A4Q9Y6R1 1079 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 STX10O60499 249 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 PPFIA2O75334 1257 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 SYT10Q6XYQ8 523 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 TSGA10Q9BZW7 698 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 KRT23Q9C075 422 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 ZSCAN22P10073 491 aaPredicted RBP6.59□□□□□ -1.35
RFX3-204ENST00000382004 CSRNP2Q9H175 543 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 TTLL3Q9Y4R7 772 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 SBNO2Q9Y2G9 1366 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 BACH1O14867 736 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 INPP1P49441 399 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 TSNAXIP1Q2TAA8 658 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 CASC4Q6P4E1 433 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 TBC1D9Q6ZT07 1266 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 B4GALNT4Q76KP1 1039 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 HDXQ7Z353 690 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 BAG1Q99933 345 aaPredicted RBP6.59□□□□□ -1.35
RFX3-204ENST00000382004 RASSF4Q9H2L5 321 aa6.59□□□□□ -1.35
RFX3-204ENST00000382004 BMP15O95972 392 aa6.59□□□□□ -1.36
RFX3-204ENST00000382004 RFC4P35249 363 aa6.59□□□□□ -1.36
RFX3-204ENST00000382004 ST5P78524 1137 aa6.59□□□□□ -1.36
RFX3-204ENST00000382004 BIRC3Q13489 604 aa6.59□□□□□ -1.36
RFX3-204ENST00000382004 MRPS27Q92552 414 aaKnown RBP6.59□□□□□ -1.36
RFX3-204ENST00000382004 NCAPGQ9BPX3 1015 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 ECHDC1Q9NTX5 307 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.58□□□□□ -1.36
RFX3-204ENST00000382004 A0A1B0GUL7 405 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 LCA5Q86VQ0 697 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 CXorf38Q8TB03 319 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 PKD2L1Q9P0L9 805 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 RTL1A6NKG5 1358 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 STK10O94804 968 aaKnown RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 USP48Q86UV5 1035 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 PDCD7Q8N8D1 485 aaKnown RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 MORC4Q8TE76 937 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 AFAP1L1Q8TED9 768 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 BRF1Q92994 677 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 NACA2Q9H009 215 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 UTP11Q9Y3A2 253 aaKnown RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 TNNI2P48788 182 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 KMT5BQ4FZB7 885 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 WDR44Q5JSH3 913 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 UTP14CQ5TAP6 766 aaKnown RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 KRT79Q5XKE5 535 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 VEZTQ9HBM0 779 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 XAB2Q9HCS7 855 aaKnown RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 WWC3Q9ULE0 1092 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 SLC8A3P57103 927 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 PHLDB2Q86SQ0 1253 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.58□□□□□ -1.36
RFX3-204ENST00000382004 SSH1Q8WYL5 1049 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 TCEANC2Q96MN5 208 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 RBM26Q5T8P6 1007 aaKnown RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 ESR2Q92731 530 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 FNBP1Q96RU3 617 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 HMG20BQ9P0W2 317 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 HDAC9Q9UKV0 1011 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 CCT6AP40227 531 aaKnown RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 C16orf71Q8IYS4 520 aaPredicted RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 KIFAP3Q92845 792 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 RILPQ96NA2 401 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 TRIM31Q9BZY9 425 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 NACADO15069 1562 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 B4DLN1 442 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 MRPL12P52815 198 aaKnown RBP6.58□□□□□ -1.36
RFX3-204ENST00000382004 TRAF1Q13077 416 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 Q6ZUG5 572 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 VSIG1Q86XK7 387 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 IFNKQ9P0W0 207 aa6.58□□□□□ -1.36
RFX3-204ENST00000382004 SLFN5Q08AF3 891 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 HHATQ5VTY9 493 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 RUFY3Q7L099 469 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 DACT1Q9NYF0 836 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 NAA16Q6N069 864 aaPredicted RBP6.57□□□□□ -1.36
RFX3-204ENST00000382004 UBE3BQ7Z3V4 1068 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 PPP1R42Q7Z4L9 355 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 KCNH5Q8NCM2 988 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms