RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 KCNB2Q92953 911 aa21.79■■□□□ 1.08
SMARCD1-201ENST00000381513 ZC3H13Q5T200 1668 aaKnown RBP21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 FOXO3O43524 673 aa21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 INPP5BP32019 993 aa21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 RDXP35241 583 aaKnown RBP21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 EVI5LQ96CN4 794 aa21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 GDAP1L1Q96MZ0 367 aa21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 RPGRIP1LQ68CZ1 1315 aa21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 MROH2AA6NES4 1674 aa21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 LRRIQ3A6PVS8 624 aaPredicted RBP21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 VSTM4Q8IW00 320 aa21.78■■□□□ 1.08
SMARCD1-201ENST00000381513 AKAP17AQ02040 695 aaKnown RBP21.77■■□□□ 1.08
SMARCD1-201ENST00000381513 RIN2Q8WYP3 895 aaPredicted RBP21.77■■□□□ 1.08
SMARCD1-201ENST00000381513 SEC62Q99442 399 aaKnown RBP21.77■■□□□ 1.08
SMARCD1-201ENST00000381513 FANCLQ9NW38 375 aa21.77■■□□□ 1.08
SMARCD1-201ENST00000381513 NUTM2FA1L443 756 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 KIF5CO60282 957 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 NUTM2GQ5VZR2 741 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 KCNV1Q6PIU1 500 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 BPIFA3Q9BQP9 254 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 CDC23Q9UJX2 597 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 CAPN7Q9Y6W3 813 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 CFAP65Q6ZU64 1925 aaKnown RBP21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 HSP90AB4PQ58FF6 505 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 ZNF569Q5MCW4 686 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 A0A0D9SFI3 127 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 POLR3DP05423 398 aaPredicted RBP21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 TRHP20396 242 aaPredicted RBP21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 SCRN1Q12765 414 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 AACSQ86V21 672 aa21.76■■□□□ 1.07
SMARCD1-201ENST00000381513 GOLIM4O00461 696 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 MYL5Q02045 173 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 NEK1Q96PY6 1258 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 DEPDC5O75140 1603 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 CTAGE15A4D2H0 777 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 ZNF202O95125 648 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 CTAGE8P0CG41 777 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 MTF1Q14872 753 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 CTAGE6Q86UF2 777 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 CTAGE4Q8IX94 777 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 MRPL44Q9H9J2 332 aaKnown RBP21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 RAB21Q9UL25 225 aa21.75■■□□□ 1.07
SMARCD1-201ENST00000381513 PTPDC1A2A3K4 754 aa21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 USP5P45974 858 aa21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 ADALQ6DHV7 355 aa21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 BOLA2Q9H3K6 86 aa21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 NBPF7P0C2Y1 421 aaPredicted RBP21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 IGSF22Q8N9C0 903 aa21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 CCDC175P0C221 793 aa21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 CAMSAP1Q5T5Y3 1602 aa21.74■■□□□ 1.07
SMARCD1-201ENST00000381513 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
SMARCD1-201ENST00000381513 STX10O60499 249 aa21.73■■□□□ 1.07
SMARCD1-201ENST00000381513 ECM2O94769 699 aaPredicted RBP21.73■■□□□ 1.07
SMARCD1-201ENST00000381513 BCAS4Q8TDM0 211 aa21.73■■□□□ 1.07
SMARCD1-201ENST00000381513 TMEM139Q8IV31 216 aa21.73■■□□□ 1.07
SMARCD1-201ENST00000381513 SHTN1A0MZ66 631 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 NAA16Q6N069 864 aaPredicted RBP21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 CPLX2Q6PUV4 134 aaKnown RBP21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 OLFM4Q6UX06 510 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 MSANTD4Q8NCY6 345 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 SAMM50Q9Y512 469 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 NEBLO76041 1014 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 EGFL6Q8IUX8 553 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 CENPHQ9H3R5 247 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 NCOA5Q9HCD5 579 aaKnown RBP21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 EIF4A2Q14240 407 aaKnown RBP21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 OTUD7BQ6GQQ9 843 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 CPLX3Q8WVH0 158 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 CCDC8Q9H0W5 538 aaPredicted RBP21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 SLC24A3Q9HC58 644 aa21.72■■□□□ 1.07
SMARCD1-201ENST00000381513 HIP1O00291 1037 aa21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 IKBKBO14920 756 aa21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 POTEDQ86YR6 584 aa21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 GNL3LQ9NVN8 582 aaKnown RBP21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 PA2G4Q9UQ80 394 aaKnown RBP21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 ATP2B2Q01814 1243 aa21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 POLA2Q14181 598 aa21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 EHD4Q9H223 541 aa21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 MAP3K5Q99683 1374 aa21.71■■□□□ 1.07
SMARCD1-201ENST00000381513 CTAGE9A4FU28 777 aa21.7■■□□□ 1.07
SMARCD1-201ENST00000381513 NF2P35240 595 aa21.7■■□□□ 1.07
SMARCD1-201ENST00000381513 TTC19Q6DKK2 380 aaPredicted RBP21.7■■□□□ 1.07
SMARCD1-201ENST00000381513 ZNF589Q86UQ0 364 aaPredicted RBP21.7■■□□□ 1.07
SMARCD1-201ENST00000381513 CRACR2AQ9BSW2 395 aa21.7■■□□□ 1.07
SMARCD1-201ENST00000381513 CCDC189A1A4V9 331 aa21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 FAM76AQ8TAV0 307 aa21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 CABS1Q96KC9 395 aa21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 PHAXQ9H814 394 aaKnown RBP21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 CLIC4Q9Y696 253 aa21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 SOWAHDA6NJG2 315 aa21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 MYO1FO00160 1098 aa21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 N4BP2L2Q92802 583 aaPredicted RBP21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 KAT14Q9H8E8 782 aa21.7■■□□□ 1.06
SMARCD1-201ENST00000381513 A0A0U1RQJ8 604 aa21.69■■□□□ 1.06
SMARCD1-201ENST00000381513 KIAA0754O94854 1291 aa21.69■■□□□ 1.06
SMARCD1-201ENST00000381513 NSUN7Q8NE18 718 aaKnown RBP21.69■■□□□ 1.06
SMARCD1-201ENST00000381513 ATRIPQ8WXE1 791 aa21.69■■□□□ 1.06
SMARCD1-201ENST00000381513 CD248Q9HCU0 757 aa21.69■■□□□ 1.06
SMARCD1-201ENST00000381513 ABCC1P33527 1531 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms