RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 CACNA1SQ13698 1873 aa24.71■■□□□ 1.55
TSSC4-203ENST00000380996 ZFYP08048 801 aaPredicted RBP24.71■■□□□ 1.55
TSSC4-203ENST00000380996 IL1R1P14778 569 aa24.71■■□□□ 1.55
TSSC4-203ENST00000380996 ZSCAN25Q6NSZ9 544 aa24.71■■□□□ 1.55
TSSC4-203ENST00000380996 NLGN2Q8NFZ4 835 aa24.71■■□□□ 1.55
TSSC4-203ENST00000380996 FHDC1Q9C0D6 1143 aaPredicted RBP24.71■■□□□ 1.55
TSSC4-203ENST00000380996 DUOX1Q9NRD9 1551 aa24.7■■□□□ 1.55
TSSC4-203ENST00000380996 SNED1Q8TER0 1413 aa24.7■■□□□ 1.54
TSSC4-203ENST00000380996 UPF2Q9HAU5 1272 aaKnown RBP24.7■■□□□ 1.54
TSSC4-203ENST00000380996 BCS1LQ9Y276 419 aa24.7■■□□□ 1.54
TSSC4-203ENST00000380996 ESYT1Q9BSJ8 1104 aa24.69■■□□□ 1.54
TSSC4-203ENST00000380996 PIH1D3Q9NQM4 214 aaKnown RBP24.69■■□□□ 1.54
TSSC4-203ENST00000380996 IDH1O75874 414 aaKnown RBP24.68■■□□□ 1.54
TSSC4-203ENST00000380996 MAP3K12Q12852 859 aa24.68■■□□□ 1.54
TSSC4-203ENST00000380996 CHAF1AQ13111 956 aaPredicted RBP24.68■■□□□ 1.54
TSSC4-203ENST00000380996 CWC27Q6UX04 472 aaKnown RBP24.68■■□□□ 1.54
TSSC4-203ENST00000380996 ZGPATQ8N5A5 531 aaKnown RBP24.68■■□□□ 1.54
TSSC4-203ENST00000380996 WDR66Q8TBY9 1149 aa24.68■■□□□ 1.54
TSSC4-203ENST00000380996 VPS33BQ9H267 617 aa24.68■■□□□ 1.54
TSSC4-203ENST00000380996 RNF113AO15541 343 aaKnown RBP24.67■■□□□ 1.54
TSSC4-203ENST00000380996 KIAA2012Q0VF49 1180 aa24.67■■□□□ 1.54
TSSC4-203ENST00000380996 LRP2BPQ9P2M1 347 aa24.67■■□□□ 1.54
TSSC4-203ENST00000380996 WWC3Q9ULE0 1092 aa24.67■■□□□ 1.54
TSSC4-203ENST00000380996 AKAP11Q9UKA4 1901 aa24.67■■□□□ 1.54
TSSC4-203ENST00000380996 REC8O95072 547 aa24.66■■□□□ 1.54
TSSC4-203ENST00000380996 SEC24BO95487 1268 aa24.66■■□□□ 1.54
TSSC4-203ENST00000380996 MFAP1P55081 439 aaKnown RBP24.66■■□□□ 1.54
TSSC4-203ENST00000380996 PODNQ7Z5L7 613 aa24.66■■□□□ 1.54
TSSC4-203ENST00000380996 ABCF2Q9UG63 623 aa24.66■■□□□ 1.54
TSSC4-203ENST00000380996 RAD50Q92878 1312 aa24.66■■□□□ 1.54
TSSC4-203ENST00000380996 IGSF3O75054 1194 aa24.66■■□□□ 1.54
TSSC4-203ENST00000380996 NMIQ13287 307 aaPredicted RBP24.66■■□□□ 1.54
TSSC4-203ENST00000380996 SPTY2D1Q68D10 685 aaPredicted RBP24.66■■□□□ 1.54
TSSC4-203ENST00000380996 AK9Q5TCS8 1911 aa24.65■■□□□ 1.54
TSSC4-203ENST00000380996 COL1A1P02452 1464 aaPredicted RBP24.65■■□□□ 1.54
TSSC4-203ENST00000380996 SGSM2O43147 1006 aa24.65■■□□□ 1.54
TSSC4-203ENST00000380996 PPIP5K2O43314 1243 aa24.65■■□□□ 1.54
TSSC4-203ENST00000380996 DOK7Q18PE1 504 aa24.65■■□□□ 1.54
TSSC4-203ENST00000380996 SLC9C2Q5TAH2 1124 aa24.65■■□□□ 1.54
TSSC4-203ENST00000380996 SALL1Q9NSC2 1324 aa24.64■■□□□ 1.54
TSSC4-203ENST00000380996 TBC1D22AQ8WUA7 517 aa24.64■■□□□ 1.53
TSSC4-203ENST00000380996 FAM227BQ96M60 508 aa24.64■■□□□ 1.53
TSSC4-203ENST00000380996 SYT17Q9BSW7 474 aa24.64■■□□□ 1.53
TSSC4-203ENST00000380996 HELLSQ9NRZ9 838 aa24.64■■□□□ 1.53
TSSC4-203ENST00000380996 UBE3CQ15386 1083 aa24.63■■□□□ 1.53
TSSC4-203ENST00000380996 AOC3Q16853 763 aa24.63■■□□□ 1.53
TSSC4-203ENST00000380996 ZMYM1Q5SVZ6 1142 aa24.63■■□□□ 1.53
TSSC4-203ENST00000380996 TMED8Q6PL24 325 aaPredicted RBP24.63■■□□□ 1.53
TSSC4-203ENST00000380996 TAOK3Q9H2K8 898 aa24.63■■□□□ 1.53
TSSC4-203ENST00000380996 RAI14Q9P0K7 980 aa24.63■■□□□ 1.53
TSSC4-203ENST00000380996 FAM205AQ6ZU69 1335 aa24.63■■□□□ 1.53
TSSC4-203ENST00000380996 BRCA1P38398 1863 aaKnown RBP24.62■■□□□ 1.53
TSSC4-203ENST00000380996 ADD2P35612 726 aa24.62■■□□□ 1.53
TSSC4-203ENST00000380996 MCMDC2Q4G0Z9 681 aa24.62■■□□□ 1.53
TSSC4-203ENST00000380996 KIAA1211Q6ZU35 1233 aa24.62■■□□□ 1.53
TSSC4-203ENST00000380996 ERICH6Q7L0X2 663 aa24.62■■□□□ 1.53
TSSC4-203ENST00000380996 A0A0D9SFI3 127 aa24.61■■□□□ 1.53
TSSC4-203ENST00000380996 PDE6AP16499 860 aa24.61■■□□□ 1.53
TSSC4-203ENST00000380996 APPBP2Q92624 585 aa24.61■■□□□ 1.53
TSSC4-203ENST00000380996 DBNDD1Q9H9R9 158 aa24.61■■□□□ 1.53
TSSC4-203ENST00000380996 ECE2O60344 883 aa24.61■■□□□ 1.53
TSSC4-203ENST00000380996 LARGE2Q8N3Y3 721 aa24.61■■□□□ 1.53
TSSC4-203ENST00000380996 TSHZ2Q9NRE2 1034 aa24.61■■□□□ 1.53
TSSC4-203ENST00000380996 ZNF277Q9NRM2 450 aaPredicted RBP24.61■■□□□ 1.53
TSSC4-203ENST00000380996 EPB41L2O43491 1005 aaKnown RBP24.6■■□□□ 1.53
TSSC4-203ENST00000380996 GTF2IP78347 998 aa24.6■■□□□ 1.53
TSSC4-203ENST00000380996 MAGEB6Q8N7X4 407 aa24.6■■□□□ 1.53
TSSC4-203ENST00000380996 ANO2Q9NQ90 1003 aa24.6■■□□□ 1.53
TSSC4-203ENST00000380996 JAG2Q9Y219 1238 aa24.6■■□□□ 1.53
TSSC4-203ENST00000380996 LDHBP07195 334 aaKnown RBP24.59■■□□□ 1.53
TSSC4-203ENST00000380996 TTLL5Q6EMB2 1281 aa24.59■■□□□ 1.53
TSSC4-203ENST00000380996 ZNF532Q9HCE3 1301 aa24.59■■□□□ 1.53
TSSC4-203ENST00000380996 LTBP3Q9NS15 1303 aa24.59■■□□□ 1.53
TSSC4-203ENST00000380996 IARSP41252 1262 aaKnown RBP24.58■■□□□ 1.53
TSSC4-203ENST00000380996 MFSD14BQ5SR56 506 aa24.58■■□□□ 1.53
TSSC4-203ENST00000380996 CHGBP05060 677 aa24.57■■□□□ 1.52
TSSC4-203ENST00000380996 FBXW7Q969H0 707 aa24.57■■□□□ 1.52
TSSC4-203ENST00000380996 IL25Q9H293 177 aa24.57■■□□□ 1.52
TSSC4-203ENST00000380996 SUGT1Q9Y2Z0 365 aa24.57■■□□□ 1.52
TSSC4-203ENST00000380996 TCRBV5S4A2TA0A5A2 114 aa24.56■■□□□ 1.52
TSSC4-203ENST00000380996 NFKBIEO00221 500 aa24.56■■□□□ 1.52
TSSC4-203ENST00000380996 PRDX5P30044 214 aa24.56■■□□□ 1.52
TSSC4-203ENST00000380996 STRIP1Q5VSL9 837 aa24.56■■□□□ 1.52
TSSC4-203ENST00000380996 NAA16Q6N069 864 aaPredicted RBP24.56■■□□□ 1.52
TSSC4-203ENST00000380996 DZIP1Q86YF9 867 aaKnown RBP24.56■■□□□ 1.52
TSSC4-203ENST00000380996 OSBP2Q969R2 916 aa24.56■■□□□ 1.52
TSSC4-203ENST00000380996 USP26Q9BXU7 913 aa24.56■■□□□ 1.52
TSSC4-203ENST00000380996 SLFNL1Q499Z3 407 aa24.56■■□□□ 1.52
TSSC4-203ENST00000380996 NIM1KQ8IY84 436 aa24.56■■□□□ 1.52
TSSC4-203ENST00000380996 SEC62Q99442 399 aaKnown RBP24.56■■□□□ 1.52
TSSC4-203ENST00000380996 CCDC171Q6TFL3 1326 aa24.55■■□□□ 1.52
TSSC4-203ENST00000380996 USP17L3A6NCW0 530 aa24.55■■□□□ 1.52
TSSC4-203ENST00000380996 USP17L4A6NCW7 530 aa24.55■■□□□ 1.52
TSSC4-203ENST00000380996 CYP7A1P22680 504 aa24.55■■□□□ 1.52
TSSC4-203ENST00000380996 FKBP1AP62942 108 aaKnown RBP24.55■■□□□ 1.52
TSSC4-203ENST00000380996 GSTO1P78417 241 aa24.55■■□□□ 1.52
TSSC4-203ENST00000380996 MECOMQ03112 1051 aa24.55■■□□□ 1.52
TSSC4-203ENST00000380996 USP17L1Q7RTZ2 530 aa24.55■■□□□ 1.52
TSSC4-203ENST00000380996 NSUN4Q96CB9 384 aaKnown RBP24.55■■□□□ 1.52
TSSC4-203ENST00000380996 C22orf23Q9BZE7 217 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms