RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 RNF20Q5VTR2 975 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 CREB3L3Q68CJ9 461 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 LTBP1Q14766 1721 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 PPEF1O14829 653 aaPredicted RBP17.73■□□□□ 0.43
POLR1E-202ENST00000377798 ZBTB22O15209 634 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 PDE6AP16499 860 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 NEK4P51957 841 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 GPSM2P81274 684 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 DSCC1Q9BVC3 393 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 WWC3Q9ULE0 1092 aa17.73■□□□□ 0.43
POLR1E-202ENST00000377798 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
POLR1E-202ENST00000377798 PDS5AQ29RF7 1337 aaKnown RBP17.73■□□□□ 0.43
POLR1E-202ENST00000377798 SLC27A2O14975 620 aa17.72■□□□□ 0.43
POLR1E-202ENST00000377798 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
POLR1E-202ENST00000377798 MASTLQ96GX5 879 aa17.72■□□□□ 0.43
POLR1E-202ENST00000377798 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
POLR1E-202ENST00000377798 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
POLR1E-202ENST00000377798 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
POLR1E-202ENST00000377798 ZNF532Q9HCE3 1301 aa17.72■□□□□ 0.43
POLR1E-202ENST00000377798 TCRBV5S4A2TA0A5A2 114 aa17.71■□□□□ 0.43
POLR1E-202ENST00000377798 ATP2B4P23634 1241 aa17.71■□□□□ 0.43
POLR1E-202ENST00000377798 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
POLR1E-202ENST00000377798 C15orf52Q6ZUT6 534 aaKnown RBP17.71■□□□□ 0.43
POLR1E-202ENST00000377798 TXNRD3Q86VQ6 643 aa17.71■□□□□ 0.43
POLR1E-202ENST00000377798 SP8Q8IXZ3 490 aa17.71■□□□□ 0.43
POLR1E-202ENST00000377798 PDGFDQ9GZP0 370 aaPredicted RBP17.71■□□□□ 0.43
POLR1E-202ENST00000377798 CACNA1SQ13698 1873 aa17.71■□□□□ 0.43
POLR1E-202ENST00000377798 HSPD1P10809 573 aaKnown RBP17.71■□□□□ 0.43
POLR1E-202ENST00000377798 GGA1Q9UJY5 639 aa17.71■□□□□ 0.43
POLR1E-202ENST00000377798 ATP6V0A2Q9Y487 856 aa17.71■□□□□ 0.43
POLR1E-202ENST00000377798 GPAA1O43292 621 aa17.7■□□□□ 0.42
POLR1E-202ENST00000377798 FRAT2O75474 233 aaPredicted RBP17.7■□□□□ 0.42
POLR1E-202ENST00000377798 UFL1O94874 794 aa17.7■□□□□ 0.42
POLR1E-202ENST00000377798 MAGEB6Q8N7X4 407 aa17.7■□□□□ 0.42
POLR1E-202ENST00000377798 SLC16A10Q8TF71 515 aa17.7■□□□□ 0.42
POLR1E-202ENST00000377798 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
POLR1E-202ENST00000377798 TM6SF1Q9BZW5 370 aa17.7■□□□□ 0.42
POLR1E-202ENST00000377798 LRP2BPQ9P2M1 347 aa17.7■□□□□ 0.42
POLR1E-202ENST00000377798 MCM2P49736 904 aa17.69■□□□□ 0.42
POLR1E-202ENST00000377798 TSGA10IPQ3SY00 556 aa17.69■□□□□ 0.42
POLR1E-202ENST00000377798 ZNF804AQ7Z570 1209 aa17.69■□□□□ 0.42
POLR1E-202ENST00000377798 C2CD5Q86YS7 1000 aa17.69■□□□□ 0.42
POLR1E-202ENST00000377798 RPAP1Q9BWH6 1393 aaPredicted RBP17.69■□□□□ 0.42
POLR1E-202ENST00000377798 ABCF2Q9UG63 623 aa17.69■□□□□ 0.42
POLR1E-202ENST00000377798 H0YIN7 160 aa17.68■□□□□ 0.42
POLR1E-202ENST00000377798 CASTP20810 708 aaKnown RBP17.68■□□□□ 0.42
POLR1E-202ENST00000377798 ADCK5Q3MIX3 580 aa17.68■□□□□ 0.42
POLR1E-202ENST00000377798 TBC1D16Q8TBP0 767 aa17.68■□□□□ 0.42
POLR1E-202ENST00000377798 JAKMIP1Q96N16 626 aaKnown RBP17.68■□□□□ 0.42
POLR1E-202ENST00000377798 STYK1Q6J9G0 422 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
POLR1E-202ENST00000377798 ZSWIM6Q9HCJ5 1215 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 MAST2Q6P0Q8 1798 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 FOXP2O15409 715 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 CYP21A2P08686 494 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 PSMA5P28066 241 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 KRT32Q14532 448 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 SPRYD3Q8NCJ5 442 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.42
POLR1E-202ENST00000377798 GPR101Q96P66 508 aaPredicted RBP17.67■□□□□ 0.42
POLR1E-202ENST00000377798 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
POLR1E-202ENST00000377798 C10orf71Q711Q0 1435 aa17.66■□□□□ 0.42
POLR1E-202ENST00000377798 SOCS7O14512 581 aa17.66■□□□□ 0.42
POLR1E-202ENST00000377798 TDRD7Q8NHU6 1098 aaKnown RBP17.66■□□□□ 0.42
POLR1E-202ENST00000377798 AIDAQ96BJ3 306 aa17.66■□□□□ 0.42
POLR1E-202ENST00000377798 TTC14Q96N46 770 aa17.66■□□□□ 0.42
POLR1E-202ENST00000377798 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
POLR1E-202ENST00000377798 CYP46A1Q9Y6A2 500 aa17.66■□□□□ 0.42
POLR1E-202ENST00000377798 TAF6LQ9Y6J9 622 aa17.66■□□□□ 0.42
POLR1E-202ENST00000377798 DUOX1Q9NRD9 1551 aa17.66■□□□□ 0.42
POLR1E-202ENST00000377798 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
POLR1E-202ENST00000377798 DLEC1Q9Y238 1755 aa17.65■□□□□ 0.42
POLR1E-202ENST00000377798 C6orf229H3BNL8 230 aa17.65■□□□□ 0.42
POLR1E-202ENST00000377798 HSP90AA1P07900 732 aaKnown RBP17.65■□□□□ 0.42
POLR1E-202ENST00000377798 CHAF1AQ13111 956 aaPredicted RBP17.65■□□□□ 0.42
POLR1E-202ENST00000377798 RUFY3Q7L099 469 aa17.65■□□□□ 0.42
POLR1E-202ENST00000377798 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
POLR1E-202ENST00000377798 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
POLR1E-202ENST00000377798 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
POLR1E-202ENST00000377798 SLX4Q8IY92 1834 aa17.64■□□□□ 0.41
POLR1E-202ENST00000377798 MPNDQ8N594 471 aa17.64■□□□□ 0.41
POLR1E-202ENST00000377798 STRBPQ96SI9 672 aaKnown RBP17.64■□□□□ 0.41
POLR1E-202ENST00000377798 CD209Q9NNX6 404 aa17.64■□□□□ 0.41
POLR1E-202ENST00000377798 MBD4O95243 580 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 FGAP02671 866 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 IL1R1P14778 569 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 CPA1P15085 419 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 CYP7A1P22680 504 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 CHRNA5P30532 468 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 ZGPATQ8N5A5 531 aaKnown RBP17.63■□□□□ 0.41
POLR1E-202ENST00000377798 WDR66Q8TBY9 1149 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 KIAA1551Q9HCM1 1747 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 LAMA4Q16363 1823 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 IGSF3O75054 1194 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 TMED8Q6PL24 325 aaPredicted RBP17.63■□□□□ 0.41
POLR1E-202ENST00000377798 BLOC1S2Q6QNY1 142 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 OLFM4Q6UX06 510 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 DPP8Q6V1X1 898 aaPredicted RBP17.63■□□□□ 0.41
POLR1E-202ENST00000377798 CNKSR1Q969H4 720 aa17.63■□□□□ 0.41
POLR1E-202ENST00000377798 TMX3Q96JJ7 454 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms