RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 TSC1Q92574 1164 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 TLDC2A0PJX2 215 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 APOBRQ0VD83 1088 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 LEO1Q8WVC0 666 aaPredicted RBP17.72■□□□□ 0.43
FBXO28-201ENST00000366862 RPGRIP1Q96KN7 1286 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 CFAP57Q96MR6 1250 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 EFCAB8A8MWE9 144 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 ATP8B1O43520 1251 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 PPP1R2P41236 205 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 LRRC45Q96CN5 670 aa17.72■□□□□ 0.43
FBXO28-201ENST00000366862 STMN2Q93045 179 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.43
FBXO28-201ENST00000366862 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 RPS6KB1P23443 525 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 CABS1Q96KC9 395 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 EHMT1Q9H9B1 1298 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 WASLO00401 505 aaPredicted RBP17.71■□□□□ 0.43
FBXO28-201ENST00000366862 TSNAXIP1Q2TAA8 658 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 TSNARE1Q96NA8 513 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 SNRKQ9NRH2 765 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 FEZ2Q9UHY8 353 aaPredicted RBP17.71■□□□□ 0.43
FBXO28-201ENST00000366862 HPDP32754 393 aaPredicted RBP17.71■□□□□ 0.43
FBXO28-201ENST00000366862 IQUBQ8NA54 791 aa17.71■□□□□ 0.43
FBXO28-201ENST00000366862 VIMP08670 466 aaKnown RBP17.71■□□□□ 0.42
FBXO28-201ENST00000366862 KIAA1524Q8TCG1 905 aa17.71■□□□□ 0.42
FBXO28-201ENST00000366862 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.42
FBXO28-201ENST00000366862 EIF2AK4Q9P2K8 1649 aaKnown RBP17.71■□□□□ 0.42
FBXO28-201ENST00000366862 DZIP1Q86YF9 867 aaKnown RBP17.7■□□□□ 0.42
FBXO28-201ENST00000366862 SEC62Q99442 399 aaKnown RBP17.7■□□□□ 0.42
FBXO28-201ENST00000366862 KCNK9Q9NPC2 374 aa17.7■□□□□ 0.42
FBXO28-201ENST00000366862 NKIRAS1Q9NYS0 192 aa17.7■□□□□ 0.42
FBXO28-201ENST00000366862 TBCAO75347 108 aaKnown RBP17.7■□□□□ 0.42
FBXO28-201ENST00000366862 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
FBXO28-201ENST00000366862 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
FBXO28-201ENST00000366862 ESR2Q92731 530 aa17.7■□□□□ 0.42
FBXO28-201ENST00000366862 ZBTB9Q96C00 473 aa17.7■□□□□ 0.42
FBXO28-201ENST00000366862 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
FBXO28-201ENST00000366862 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 NAP1L3Q99457 506 aaPredicted RBP17.69■□□□□ 0.42
FBXO28-201ENST00000366862 VCXQ9H320 206 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 SNX14Q9Y5W7 946 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 MPRIPQ6WCQ1 1025 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 GAS2L3Q86XJ1 694 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 ZNF215Q9UL58 517 aaPredicted RBP17.69■□□□□ 0.42
FBXO28-201ENST00000366862 TSPY2A6NKD2 308 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 THEMISQ8N1K5 641 aaPredicted RBP17.69■□□□□ 0.42
FBXO28-201ENST00000366862 MPHOSPH10O00566 681 aaKnown RBP17.69■□□□□ 0.42
FBXO28-201ENST00000366862 PPP4R3AQ6IN85 833 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 UBE3BQ7Z3V4 1068 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 ZSCAN29Q8IWY8 852 aaPredicted RBP17.69■□□□□ 0.42
FBXO28-201ENST00000366862 JAKMIP2Q96AA8 810 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
FBXO28-201ENST00000366862 CALCOCO2Q13137 446 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 SYCP3Q8IZU3 236 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 ERMNQ8TAM6 284 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 NOS1P29475 1434 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 KRT2P35908 639 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 WHAMMP3Q1A5X7 153 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 ERCC6LQ2NKX8 1250 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 SMIM23A6NLE4 172 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 GNAQP50148 359 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 FERMT1Q9BQL6 677 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 BLMP54132 1417 aaPredicted RBP17.68■□□□□ 0.42
FBXO28-201ENST00000366862 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 SETSIPP0DME0 302 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 PAK2Q13177 524 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 NOL3O60936 208 aaKnown RBP17.68■□□□□ 0.42
FBXO28-201ENST00000366862 CIB2O75838 187 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 CALM1P0DP23 149 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 CALM2P0DP24 149 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 CALM3P0DP25 149 aa17.68■□□□□ 0.42
FBXO28-201ENST00000366862 PTPRKQ15262 1439 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 CALML3P27482 149 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 MED4Q9NPJ6 270 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 ZRANB1Q9UGI0 708 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 MTUS1Q9ULD2 1270 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 FAM69CQ0P6D2 419 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 IFIT1BQ5T764 474 aaKnown RBP17.67■□□□□ 0.42
FBXO28-201ENST00000366862 ANO1Q5XXA6 986 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 NUP58Q9BVL2 599 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 GRM8O00222 908 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 KIF3CO14782 793 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 BANK1Q8NDB2 785 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 FERMT2Q96AC1 680 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.67■□□□□ 0.42
FBXO28-201ENST00000366862 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 RTL9Q8NET4 1388 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 LDHAL6AQ6ZMR3 332 aa17.67■□□□□ 0.42
FBXO28-201ENST00000366862 SECISBP2LQ93073 1101 aaKnown RBP17.67■□□□□ 0.42
FBXO28-201ENST00000366862 PER1O15534 1290 aaPredicted RBP17.66■□□□□ 0.42
FBXO28-201ENST00000366862 MRFAP1L1Q96HT8 127 aa17.66■□□□□ 0.42
FBXO28-201ENST00000366862 CEP128Q6ZU80 1094 aa17.66■□□□□ 0.42
FBXO28-201ENST00000366862 CCDC110Q8TBZ0 833 aa17.66■□□□□ 0.42
FBXO28-201ENST00000366862 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
FBXO28-201ENST00000366862 GOLGA8KD6RF30 607 aa17.66■□□□□ 0.42
FBXO28-201ENST00000366862 RNF113AO15541 343 aaKnown RBP17.66■□□□□ 0.42
FBXO28-201ENST00000366862 FAM71BQ8TC56 605 aa17.66■□□□□ 0.42
FBXO28-201ENST00000366862 RBM5P52756 815 aaKnown RBP eCLIP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms