RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PERM1Q5SV97 790 aa8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 SV2BQ7L1I2 683 aa8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 SLC43A3Q8NBI5 491 aa8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 PLD4Q96BZ4 506 aa8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 RSRP1Q9BUV0 290 aa8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 MUC3BQ9H195 1237 aa8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 ZNF576Q9H609 170 aa8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 MBIPQ9NS73 344 aa8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 ADARB2-AS1A8MUL3 147 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 F6X3S4 739 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 CELA3AP09093 270 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 MAP2K3P46734 347 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 GNL2Q13823 731 aaKnown RBP8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 MAP3K11Q16584 847 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 FCHSD1Q86WN1 690 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 MICALL1Q8N3F8 863 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 MDFIQ99750 246 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 CEP44Q9C0F1 390 aa8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 SMG9Q9H0W8 520 aaKnown RBP8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.02
RNU4-39P-201ENST00000362455 FAAP100Q0VG06 881 aa8.7□□□□□ -1.02
RNU4-39P-201ENST00000362455 RPS26P11Q5JNZ5 115 aaPredicted RBP8.7□□□□□ -1.02
RNU4-39P-201ENST00000362455 ELMSAN1Q6PJG2 1045 aa8.7□□□□□ -1.02
RNU4-39P-201ENST00000362455 ADAMTSL4Q6UY14 1074 aa8.7□□□□□ -1.02
RNU4-39P-201ENST00000362455 RELL1Q8IUW5 271 aa8.7□□□□□ -1.02
RNU4-39P-201ENST00000362455 SEC31BQ9NQW1 1179 aa8.7□□□□□ -1.02
RNU4-39P-201ENST00000362455 PPP1R1BQ9UD71 204 aaPredicted RBP8.7□□□□□ -1.02
RNU4-39P-201ENST00000362455 ENC1O14682 589 aa8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 PWP1Q13610 501 aa8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 BSNDQ8WZ55 320 aa8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 ZNF775Q96BV0 537 aaPredicted RBP8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 NECAB3Q96P71 396 aaPredicted RBP8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 LPIN3Q9BQK8 851 aa8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 GGA1Q9UJY5 639 aa8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 TRIM33Q9UPN9 1127 aa8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 ERBB4Q15303 1308 aa8.69□□□□□ -1.02
RNU4-39P-201ENST00000362455 LOC105371045A0A1W2PR82 267 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 MINDY4BA8MYZ0 360 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 WFS1O76024 890 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 RLBP1P12271 317 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 PTPRAP18433 802 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 GBP2P32456 591 aaPredicted RBP8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 PAK2Q13177 524 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 RNFT1Q5M7Z0 435 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 TMEM74Q96NL1 305 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 COL25A1Q9BXS0 654 aaPredicted RBP8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 TANGO6Q9C0B7 1094 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 CLEC4MQ9H2X3 399 aaPredicted RBP8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 FRRS1LQ9P0K9 344 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 GPN3Q9UHW5 284 aaPredicted RBP8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 SOX13Q9UN79 622 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 IGF1RP08069 1367 aa8.68□□□□□ -1.02
RNU4-39P-201ENST00000362455 ELOA3CA0A087WX78 387 aaPredicted RBP8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 ELOA3DA6NLF2 546 aaPredicted RBP8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 DNAJA1P31689 397 aaKnown RBP8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 LIG3P49916 1009 aa8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 ELOA3BQ3SY89 546 aa8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 PSAPL1Q6NUJ1 521 aa8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 ELOA3Q8NG57 546 aa8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 LACRTQ9GZZ8 138 aa8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 ADAM19Q9H013 955 aa8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 PRKAG2Q9UGJ0 569 aa8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 ADAMTS1Q9UHI8 967 aa8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 ZNF608Q9ULD9 1512 aaPredicted RBP8.67□□□□□ -1.02
RNU4-39P-201ENST00000362455 PAGE1O75459 146 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 GJA8P48165 433 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 ZNF157P51786 506 aaPredicted RBP8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 PCDH1Q08174 1060 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 VN1R5Q7Z5H4 357 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 PHC3Q8NDX5 983 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 UBXN4Q92575 508 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 RHOVQ96L33 236 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 GMLQ99445 158 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 SPON2Q9BUD6 331 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 TMEM39AQ9NV64 488 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 TLR6Q9Y2C9 796 aa8.66□□□□□ -1.02
RNU4-39P-201ENST00000362455 EIF4A3P38919 411 aaKnown RBP8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 ARID5AQ03989 594 aa8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 GDF6Q6KF10 455 aaPredicted RBP8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 SLCO4C1Q6ZQN7 724 aa8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 KIAA0825Q8IV33 1275 aa8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 GOLGA6L1Q8N7Z2 621 aa8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 GPRASP2Q96D09 838 aa8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 SH2B1Q9NRF2 756 aaPredicted RBP8.65□□□□□ -1.02
RNU4-39P-201ENST00000362455 B3GALT4O96024 378 aa8.64□□□□□ -1.03
RNU4-39P-201ENST00000362455 ALAS2P22557 587 aa8.64□□□□□ -1.03
RNU4-39P-201ENST00000362455 ZNF423Q2M1K9 1284 aa8.64□□□□□ -1.03
RNU4-39P-201ENST00000362455 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
RNU4-39P-201ENST00000362455 NUDT8Q8WV74 236 aa8.64□□□□□ -1.03
RNU4-39P-201ENST00000362455 TTC9Q92623 222 aa8.64□□□□□ -1.03
RNU4-39P-201ENST00000362455 GDF2Q9UK05 429 aaPredicted RBP8.64□□□□□ -1.03
RNU4-39P-201ENST00000362455 STARD13Q9Y3M8 1113 aa8.64□□□□□ -1.03
RNU4-39P-201ENST00000362455 FAM177BA6PVY3 158 aa8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 RGS9O75916 674 aaPredicted RBP8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 PF4P02776 101 aa8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 CDC27P30260 824 aa8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 FAM160A1Q05DH4 1040 aa8.63□□□□□ -1.03
RNU4-39P-201ENST00000362455 PPP2R3AQ06190 1150 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms