RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ADAM19Q9H013 955 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 MUC3BQ9H195 1237 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 MBIPQ9NS73 344 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 FRRS1LQ9P0K9 344 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 NXF1Q9UBU9 619 aaKnown RBP5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 PPP1R1BQ9UD71 204 aaPredicted RBP5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 NAGPAQ9UK23 515 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 SOX13Q9UN79 622 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 CPB1P15086 417 aa5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 ATF4P18848 351 aaPredicted RBP5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 ATP2B1P20020 1258 aa5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 GBP2P32456 591 aaPredicted RBP5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 EIF4A3P38919 411 aaKnown RBP5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 ADH7P40394 386 aa5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 LIG3P49916 1009 aa5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 RPS26P62854 115 aaKnown RBP5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 TBC1D8BQ0IIM8 1120 aa5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 CEP135Q66GS9 1140 aa5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 KIAA0825Q8IV33 1275 aa5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 GPR161Q8N6U8 529 aaKnown RBP5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 SPATA32Q96LK8 384 aa5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 CLEC4MQ9H2X3 399 aaPredicted RBP5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 NSFL1CQ9UNZ2 370 aaKnown RBP5.83□□□□□ -1.48
RNU6-28P-201ENST00000362378 ELOA3CA0A087WX78 387 aaPredicted RBP5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 ELOA3DA6NLF2 546 aaPredicted RBP5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 MINDY4BA8MYZ0 360 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 H3BM21 787 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 GREM1O60565 184 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 FGRP09769 529 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 VSIG8P0DPA2 414 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 PTPRAP18433 802 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 GARTP22102 1010 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 DNAJA1P31689 397 aaKnown RBP5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 LMNB2Q03252 620 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 NFX1Q12986 1120 aaKnown RBP5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 ELOA3BQ3SY89 546 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 ELMSAN1Q6PJG2 1045 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 AGMOQ6ZNB7 445 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 VN1R5Q7Z5H4 357 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 FCHSD1Q86WN1 690 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 CACTIN-AS1Q8N1I8 211 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 MICALL1Q8N3F8 863 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 ELOA3Q8NG57 546 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 ZNF296Q8WUU4 475 aaPredicted RBP5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 LPIN3Q9BQK8 851 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 NT5C1AQ9BXI3 368 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 TMEM39AQ9NV64 488 aa5.82□□□□□ -1.48
RNU6-28P-201ENST00000362378 PAGE1O75459 146 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 B3GALT4O96024 378 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 PF4P02776 101 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 PPP2R3AQ06190 1150 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 PCDH1Q08174 1060 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 CAMK2GQ13555 558 aaPredicted RBP5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 MAP3K11Q16584 847 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 ZNF423Q2M1K9 1284 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 TTBK2Q6IQ55 1244 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 ADAMTSL4Q6UY14 1074 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 MCF2L2Q86YR7 1114 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 EAF1Q96JC9 268 aaPredicted RBP5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 SEC16BQ96JE7 1060 aa5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 SMG9Q9H0W8 520 aaKnown RBP5.81□□□□□ -1.48
RNU6-28P-201ENST00000362378 NEURL1BA8MQ27 555 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 F6X3S4 739 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 TFE3P19532 575 aaPredicted RBP5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 BMP6P22004 513 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 RBL2Q08999 1139 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 PCNX4Q63HM2 1172 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 FBXL19Q6PCT2 694 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 CCDC84Q86UT8 332 aaPredicted RBP5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 DHX38Q92620 1227 aaKnown RBP5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 GPN3Q9UHW5 284 aaPredicted RBP5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 GGA1Q9UJY5 639 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 TRIM33Q9UPN9 1127 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 TLR6Q9Y2C9 796 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 SAMM50Q9Y512 469 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 SUPT16HQ9Y5B9 1047 aaKnown RBP5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 IGF1RP08069 1367 aa5.8□□□□□ -1.48
RNU6-28P-201ENST00000362378 ESRRAP11474 423 aaPredicted RBP5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 NME2P22392 152 aa5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 GTF2F1P35269 517 aaKnown RBP eCLIP5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 COL9A2Q14055 689 aaPredicted RBP5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 PSAPL1Q6NUJ1 521 aa5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 SLCO4C1Q6ZQN7 724 aa5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 GOLGA6L1Q8N7Z2 621 aa5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 GDF2Q9UK05 429 aaPredicted RBP5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 ROBO2Q9HCK4 1378 aa5.79□□□□□ -1.48
RNU6-28P-201ENST00000362378 ALAS2P22557 587 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 CDC27P30260 824 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 SOX9P48436 509 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 FAM160A1Q05DH4 1040 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 GRIK5Q16478 980 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 SNAP47Q5SQN1 464 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 RASIP1Q5U651 963 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 SCARA3Q6AZY7 606 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 C20orf204Q6ZNR8 217 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 FAM196AQ6ZSG2 479 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 TRIM42Q8IWZ5 723 aa5.78□□□□□ -1.48
RNU6-28P-201ENST00000362378 GOLM1Q8NBJ4 401 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms