RNA–Protein interactions for RNA: ENST00000361971.9

PLXNB3-201, Transcript of plexin B3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PLXNB3, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-201ENST00000361971 ARID5AQ03989 594 aa18.7■□□□□ 0.58
PLXNB3-201ENST00000361971 PLBD2Q8NHP8 589 aa18.7■□□□□ 0.58
PLXNB3-201ENST00000361971 ZNF594Q96JF6 807 aaPredicted RBP18.7■□□□□ 0.58
PLXNB3-201ENST00000361971 MCM3P25205 808 aa18.7■□□□□ 0.58
PLXNB3-201ENST00000361971 PTPRKQ15262 1439 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 PARP10Q53GL7 1025 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 NUP160Q12769 1436 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 TMEM110-MUSTN1A8MSY1 372 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 TAF5LO75529 589 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 UBASH3AP57075 661 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 A1BGP04217 495 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 ARMT1Q9H993 441 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 TIMM10P62072 90 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 CREB3L3Q68CJ9 461 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 DDX21Q9NR30 783 aaKnown RBP eCLIP18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 HOMER2Q9NSB8 354 aa18.69■□□□□ 0.58
PLXNB3-201ENST00000361971 TAF12Q16514 161 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 MRPS27Q92552 414 aaKnown RBP18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 CCDC171Q6TFL3 1326 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 MSL1Q68DK7 614 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 SH3TC1Q8TE82 1336 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 CCDC87Q9NVE4 849 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 PDCL2Q8N4E4 241 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 SSX2IPQ9Y2D8 614 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 PDE8AO60658 829 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 GNA11P29992 359 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
PLXNB3-201ENST00000361971 PSMA7O14818 248 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 A0A1B0GUL7 405 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 PUM3Q15397 648 aaKnown RBP18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 TSNARE1Q96NA8 513 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 ZFYVE9O95405 1425 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 STAMBPO95630 424 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 LGR6Q9HBX8 967 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 EIF2AK4Q9P2K8 1649 aaKnown RBP18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 IFI16Q16666 785 aaKnown RBP18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 G2E3Q7L622 706 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 FCHSD1Q86WN1 690 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 CHMP2AO43633 222 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 TERF1P54274 439 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 CCDC129Q6ZRS4 1044 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 KLHDC4Q8TBB5 520 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 CARD14Q9BXL6 1004 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 ZSWIM4Q9H7M6 989 aa18.67■□□□□ 0.58
PLXNB3-201ENST00000361971 NOD1Q9Y239 953 aa18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 PTGS1P23219 599 aa18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 METTL22Q9BUU2 404 aaPredicted RBP18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 ANO6Q4KMQ2 910 aa18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 HARSP12081 509 aaKnown RBP18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 USP48Q86UV5 1035 aa18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 OTUD6BQ8N6M0 293 aa18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 ARHGEF10LQ9HCE6 1279 aa18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 EEF2P13639 858 aaKnown RBP18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 DNM1Q05193 864 aaKnown RBP18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 TCP10Q12799 353 aa18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 MAATS1Q7Z4T9 603 aa18.66■□□□□ 0.58
PLXNB3-201ENST00000361971 CTTNBP2Q8WZ74 1663 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 POLR3AO14802 1390 aaPredicted RBP18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 FSD2A1L4K1 749 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 INCENPQ9NQS7 918 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 AATFQ9NY61 560 aaKnown RBP eCLIP18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 SLAIN2Q9P270 581 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 SHTN1A0MZ66 631 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 NEMFO60524 1076 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 CALRP27797 417 aaKnown RBP18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 SNW1Q13573 536 aaKnown RBP18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 KIAA0753Q2KHM9 967 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 CTAGE1Q96RT6 745 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 XAGE2Q96GT9 111 aa18.65■□□□□ 0.58
PLXNB3-201ENST00000361971 SPTLC2O15270 562 aa18.64■□□□□ 0.58
PLXNB3-201ENST00000361971 AK2P54819 239 aa18.64■□□□□ 0.58
PLXNB3-201ENST00000361971 LETM2Q2VYF4 491 aa18.64■□□□□ 0.57
PLXNB3-201ENST00000361971 DTHD1Q6ZMT9 781 aa18.64■□□□□ 0.57
PLXNB3-201ENST00000361971 IKBKGQ9Y6K9 419 aa18.64■□□□□ 0.57
PLXNB3-201ENST00000361971 PTPDC1A2A3K4 754 aa18.64■□□□□ 0.57
PLXNB3-201ENST00000361971 B4E1Z4 1266 aa18.64■□□□□ 0.57
PLXNB3-201ENST00000361971 EYA2O00167 538 aa18.64■□□□□ 0.57
PLXNB3-201ENST00000361971 SMC1AQ14683 1233 aaKnown RBP18.64■□□□□ 0.57
PLXNB3-201ENST00000361971 RTL1A6NKG5 1358 aa18.64■□□□□ 0.57
PLXNB3-201ENST00000361971 GNG11P61952 73 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 LRSAM1Q6UWE0 723 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 ARL1P40616 181 aaPredicted RBP18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 ZSCAN23Q3MJ62 389 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 AOPEPQ8N6M6 819 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 LRRC45Q96CN5 670 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 F13A1P00488 732 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 MYCLP12524 364 aaPredicted RBP18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 BAG6P46379 1132 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 STX17P56962 302 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 ZNF174Q15697 407 aa18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 DHX32Q7L7V1 743 aaKnown RBP18.63■□□□□ 0.57
PLXNB3-201ENST00000361971 DNAJC10Q8IXB1 793 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms