RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TRIM47Q96LD4 638 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 LRP2BPQ9P2M1 347 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 PNMA6AP0CW24 399 aaPredicted RBP18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 ENOX2Q16206 610 aaKnown RBP18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 ADALQ6DHV7 355 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 CCDC113Q9H0I3 377 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 MORC2Q9Y6X9 1032 aaPredicted RBP18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 KRT83P78385 493 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 KMT5BQ4FZB7 885 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 DYDC1Q8WWB3 177 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 LARGE1O95461 756 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 SSBP05455 408 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 NCKAP5LQ9HCH0 1330 aa18.17■□□□□ 0.5
CLSTN1-201ENST00000361311 INPP5BP32019 993 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 ARID5BQ14865 1188 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 CERS3Q8IU89 383 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 KRI1Q8N9T8 703 aaKnown RBP18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 PPP2R2CQ9Y2T4 447 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 TTC37Q6PGP7 1564 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 ZFYP08048 801 aaPredicted RBP18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 MAP2K1Q02750 393 aaPredicted RBP18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 KCNH5Q8NCM2 988 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 BICC1Q9H694 974 aaKnown RBP18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 KCNH3Q9ULD8 1083 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 TTF2Q9UNY4 1162 aaKnown RBP18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 PTCH1Q13635 1447 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 A0A087WWV3 80 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 KIF5AQ12840 1032 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 RABEP2Q9H5N1 569 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 RRP15Q9Y3B9 282 aaKnown RBP18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 TACC1O75410 805 aa18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
CLSTN1-201ENST00000361311 ARHGEF5Q12774 1597 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 NDUFAB1O14561 156 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 EZRP15311 586 aaKnown RBP18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 ADKP55263 362 aaKnown RBP18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 XAGE3Q8WTP9 111 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 LMBR1LQ6UX01 489 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 PRDM4Q9UKN5 801 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 GOLGA6CA6NDK9 693 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 ZNF853P0CG23 659 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 GOLGA6DP0CG33 693 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 TFCP2Q12800 502 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 CCDC122Q5T0U0 273 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 ZNF710Q8N1W2 664 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 PYM1Q9BRP8 204 aaKnown RBP18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 BMP2KQ9NSY1 1161 aaPredicted RBP18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 GOLGA6AQ9NYA3 693 aa18.15■□□□□ 0.5
CLSTN1-201ENST00000361311 SPECC1LQ69YQ0 1117 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 RABGGTAQ92696 567 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 DESI2Q9BSY9 194 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 IFIT5Q13325 482 aaKnown RBP18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 CCDC121Q6ZUS5 278 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 TTC21AQ8NDW8 1320 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 FLT4P35916 1363 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 YTHDC2Q9H6S0 1430 aaKnown RBP18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 NLRP5P59047 1200 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 ANKRD7Q92527 254 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 PDE11AQ9HCR9 933 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 RMND1Q9NWS8 449 aa18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 LUC7L2Q9Y383 392 aaKnown RBP18.14■□□□□ 0.49
CLSTN1-201ENST00000361311 MAP3K12Q12852 859 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 CCDC114Q96M63 670 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 GNL3LQ9NVN8 582 aaKnown RBP18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 PLXNC1O60486 1568 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 RXRAP19793 462 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 KCNF1Q9H3M0 494 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 A0A0D9SFI3 127 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 RNF113AO15541 343 aaKnown RBP18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 ACTN2P35609 894 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 CCT6AP40227 531 aaKnown RBP18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 UBA7P41226 1012 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 RNF41Q9H4P4 317 aaPredicted RBP18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 ABCF2Q9UG63 623 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 ZBTB22O15209 634 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 VAV2P52735 878 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 UBXN1Q04323 297 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 ZFYVE27Q5T4F4 411 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 B4GALNT4Q76KP1 1039 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 MLKLQ8NB16 471 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 KLHDC4Q8TBB5 520 aa18.13■□□□□ 0.49
CLSTN1-201ENST00000361311 ATP10AO60312 1499 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 MAP3K5Q99683 1374 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 TRIM75PA6NK02 468 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 SLFNL1Q499Z3 407 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 PCDHA7Q9UN72 937 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 MAP3K19Q56UN5 1328 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 BMP15O95972 392 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 LONRF2Q1L5Z9 754 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 MFSD6Q6ZSS7 791 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 FAM114A1Q8IWE2 563 aa18.12■□□□□ 0.49
CLSTN1-201ENST00000361311 MYO1BO43795 1136 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms