RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 PDS5AQ29RF7 1337 aaKnown RBP24.35■■□□□ 1.49
SIGMAR1-202ENST00000353468 TICAM2Q86XR7 235 aa24.35■■□□□ 1.49
SIGMAR1-202ENST00000353468 SYT17Q9BSW7 474 aa24.35■■□□□ 1.49
SIGMAR1-202ENST00000353468 PIH1D3Q9NQM4 214 aaKnown RBP24.35■■□□□ 1.49
SIGMAR1-202ENST00000353468 COL1A1P02452 1464 aaPredicted RBP24.34■■□□□ 1.49
SIGMAR1-202ENST00000353468 DIAPH3Q9NSV4 1193 aa24.34■■□□□ 1.49
SIGMAR1-202ENST00000353468 RFX7Q2KHR2 1363 aa24.34■■□□□ 1.49
SIGMAR1-202ENST00000353468 G3V3G9 751 aa24.33■■□□□ 1.49
SIGMAR1-202ENST00000353468 DCAF8Q5TAQ9 597 aa24.33■■□□□ 1.49
SIGMAR1-202ENST00000353468 SEC24BO95487 1268 aa24.33■■□□□ 1.48
SIGMAR1-202ENST00000353468 KIAA2012Q0VF49 1180 aa24.33■■□□□ 1.48
SIGMAR1-202ENST00000353468 CHAF1AQ13111 956 aaPredicted RBP24.33■■□□□ 1.48
SIGMAR1-202ENST00000353468 DOK7Q18PE1 504 aa24.33■■□□□ 1.48
SIGMAR1-202ENST00000353468 LRRFIP1Q32MZ4 808 aaKnown RBP24.33■■□□□ 1.48
SIGMAR1-202ENST00000353468 MYH13Q9UKX3 1938 aa24.32■■□□□ 1.48
SIGMAR1-202ENST00000353468 IDH1O75874 414 aaKnown RBP24.31■■□□□ 1.48
SIGMAR1-202ENST00000353468 AOC3Q16853 763 aa24.31■■□□□ 1.48
SIGMAR1-202ENST00000353468 CWC27Q6UX04 472 aaKnown RBP24.31■■□□□ 1.48
SIGMAR1-202ENST00000353468 ESYT1Q9BSJ8 1104 aa24.31■■□□□ 1.48
SIGMAR1-202ENST00000353468 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.31■■□□□ 1.48
SIGMAR1-202ENST00000353468 PPIP5K2O43314 1243 aa24.3■■□□□ 1.48
SIGMAR1-202ENST00000353468 WDR66Q8TBY9 1149 aa24.3■■□□□ 1.48
SIGMAR1-202ENST00000353468 RUFY2Q8WXA3 655 aa24.3■■□□□ 1.48
SIGMAR1-202ENST00000353468 VPS33BQ9H267 617 aa24.3■■□□□ 1.48
SIGMAR1-202ENST00000353468 LRP2BPQ9P2M1 347 aa24.3■■□□□ 1.48
SIGMAR1-202ENST00000353468 ABCF2Q9UG63 623 aa24.3■■□□□ 1.48
SIGMAR1-202ENST00000353468 RNF113AO15541 343 aaKnown RBP24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 EIF5BO60841 1220 aaKnown RBP24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 ZFYP08048 801 aaPredicted RBP24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 MAP3K12Q12852 859 aa24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 NMIQ13287 307 aaPredicted RBP24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 ZSCAN25Q6NSZ9 544 aa24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 PODNQ7Z5L7 613 aa24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 FAM227BQ96M60 508 aa24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 DBNDD1Q9H9R9 158 aa24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 JAG2Q9Y219 1238 aa24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 MYO5AQ9Y4I1 1855 aaKnown RBP24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 CHGBP05060 677 aa24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 ZNF277Q9NRM2 450 aaPredicted RBP24.29■■□□□ 1.48
SIGMAR1-202ENST00000353468 SALL1Q9NSC2 1324 aa24.28■■□□□ 1.48
SIGMAR1-202ENST00000353468 ARFGEF1Q9Y6D6 1849 aa24.28■■□□□ 1.48
SIGMAR1-202ENST00000353468 MFAP1P55081 439 aaKnown RBP24.28■■□□□ 1.48
SIGMAR1-202ENST00000353468 TAOK3Q9H2K8 898 aa24.28■■□□□ 1.48
SIGMAR1-202ENST00000353468 FER1L6Q2WGJ9 1857 aa24.28■■□□□ 1.48
SIGMAR1-202ENST00000353468 FAM205AQ6ZU69 1335 aa24.27■■□□□ 1.48
SIGMAR1-202ENST00000353468 A0A0D9SFI3 127 aa24.27■■□□□ 1.48
SIGMAR1-202ENST00000353468 SGSM2O43147 1006 aa24.27■■□□□ 1.48
SIGMAR1-202ENST00000353468 ECE2O60344 883 aa24.27■■□□□ 1.48
SIGMAR1-202ENST00000353468 ADD2P35612 726 aa24.27■■□□□ 1.48
SIGMAR1-202ENST00000353468 SLC9C2Q5TAH2 1124 aa24.27■■□□□ 1.48
SIGMAR1-202ENST00000353468 ZGPATQ8N5A5 531 aaKnown RBP24.27■■□□□ 1.48
SIGMAR1-202ENST00000353468 CHD4Q14839 1912 aa24.27■■□□□ 1.48
SIGMAR1-202ENST00000353468 DOCK2Q92608 1830 aa24.26■■□□□ 1.47
SIGMAR1-202ENST00000353468 NFKBIEO00221 500 aa24.26■■□□□ 1.47
SIGMAR1-202ENST00000353468 GTF2IP78347 998 aa24.26■■□□□ 1.47
SIGMAR1-202ENST00000353468 SLFNL1Q499Z3 407 aa24.26■■□□□ 1.47
SIGMAR1-202ENST00000353468 ZMYM1Q5SVZ6 1142 aa24.26■■□□□ 1.47
SIGMAR1-202ENST00000353468 ERICH6Q7L0X2 663 aa24.26■■□□□ 1.47
SIGMAR1-202ENST00000353468 IL25Q9H293 177 aa24.26■■□□□ 1.47
SIGMAR1-202ENST00000353468 PDE6AP16499 860 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 UBE3CQ15386 1083 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 SPTY2D1Q68D10 685 aaPredicted RBP24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 LARGE2Q8N3Y3 721 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 HELLSQ9NRZ9 838 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 RAI14Q9P0K7 980 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 MYH7P12883 1935 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 IARSP41252 1262 aaKnown RBP24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 TTLL5Q6EMB2 1281 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 MAGEB6Q8N7X4 407 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 TBC1D22AQ8WUA7 517 aa24.25■■□□□ 1.47
SIGMAR1-202ENST00000353468 RAD50Q92878 1312 aa24.24■■□□□ 1.47
SIGMAR1-202ENST00000353468 LTBP3Q9NS15 1303 aa24.24■■□□□ 1.47
SIGMAR1-202ENST00000353468 GOLGB1Q14789 3259 aaKnown RBP24.24■■□□□ 1.47
SIGMAR1-202ENST00000353468 REC8O95072 547 aa24.24■■□□□ 1.47
SIGMAR1-202ENST00000353468 PRDX5P30044 214 aa24.24■■□□□ 1.47
SIGMAR1-202ENST00000353468 MCMDC2Q4G0Z9 681 aa24.24■■□□□ 1.47
SIGMAR1-202ENST00000353468 APPBP2Q92624 585 aa24.24■■□□□ 1.47
SIGMAR1-202ENST00000353468 SEC62Q99442 399 aaKnown RBP24.24■■□□□ 1.47
SIGMAR1-202ENST00000353468 ZNF532Q9HCE3 1301 aa24.23■■□□□ 1.47
SIGMAR1-202ENST00000353468 TCRBV5S4A2TA0A5A2 114 aa24.23■■□□□ 1.47
SIGMAR1-202ENST00000353468 FBXW7Q969H0 707 aa24.23■■□□□ 1.47
SIGMAR1-202ENST00000353468 UPF2Q9HAU5 1272 aaKnown RBP24.23■■□□□ 1.47
SIGMAR1-202ENST00000353468 IGSF3O75054 1194 aa24.22■■□□□ 1.47
SIGMAR1-202ENST00000353468 MFSD14BQ5SR56 506 aa24.22■■□□□ 1.47
SIGMAR1-202ENST00000353468 OSBP2Q969R2 916 aa24.22■■□□□ 1.47
SIGMAR1-202ENST00000353468 KCNQ5Q9NR82 932 aa24.22■■□□□ 1.47
SIGMAR1-202ENST00000353468 LDHBP07195 334 aaKnown RBP24.21■■□□□ 1.47
SIGMAR1-202ENST00000353468 TSHZ2Q9NRE2 1034 aa24.21■■□□□ 1.47
SIGMAR1-202ENST00000353468 YDJCA8MPS7 323 aa24.2■■□□□ 1.47
SIGMAR1-202ENST00000353468 STRIP1Q5VSL9 837 aa24.2■■□□□ 1.47
SIGMAR1-202ENST00000353468 NIM1KQ8IY84 436 aa24.2■■□□□ 1.47
SIGMAR1-202ENST00000353468 NSUN4Q96CB9 384 aaKnown RBP24.2■■□□□ 1.47
SIGMAR1-202ENST00000353468 ANO2Q9NQ90 1003 aa24.2■■□□□ 1.47
SIGMAR1-202ENST00000353468 USP17L3A6NCW0 530 aa24.2■■□□□ 1.46
SIGMAR1-202ENST00000353468 USP17L4A6NCW7 530 aa24.2■■□□□ 1.46
SIGMAR1-202ENST00000353468 CYP7A1P22680 504 aa24.2■■□□□ 1.46
SIGMAR1-202ENST00000353468 RASSF7Q02833 373 aa24.2■■□□□ 1.46
SIGMAR1-202ENST00000353468 MECOMQ03112 1051 aa24.2■■□□□ 1.46
SIGMAR1-202ENST00000353468 GRIK5Q16478 980 aa24.2■■□□□ 1.46
SIGMAR1-202ENST00000353468 NAA16Q6N069 864 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms