RNA–Protein interactions for RNA: ENST00000335698.4

ATP5C1-201, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP5C1, Length 1,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-201ENST00000335698 ZNF775Q96BV0 537 aaPredicted RBP17.22■□□□□ 0.35
ATP5C1-201ENST00000335698 GRM8O00222 908 aa17.21■□□□□ 0.35
ATP5C1-201ENST00000335698 CASP7P55210 303 aa17.21■□□□□ 0.35
ATP5C1-201ENST00000335698 TMEM57Q8N5G2 664 aa17.21■□□□□ 0.35
ATP5C1-201ENST00000335698 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
ATP5C1-201ENST00000335698 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.34
ATP5C1-201ENST00000335698 KIF13BQ9NQT8 1826 aa17.2■□□□□ 0.34
ATP5C1-201ENST00000335698 SRGNP10124 158 aa17.2■□□□□ 0.34
ATP5C1-201ENST00000335698 RLBP1P12271 317 aa17.2■□□□□ 0.34
ATP5C1-201ENST00000335698 PUS10Q3MIT2 529 aaKnown RBP17.2■□□□□ 0.34
ATP5C1-201ENST00000335698 FTSJ3Q8IY81 847 aaKnown RBP17.2■□□□□ 0.34
ATP5C1-201ENST00000335698 ZNF622Q969S3 477 aaKnown RBP eCLIP17.2■□□□□ 0.343e-9■□□□□ 9
ATP5C1-201ENST00000335698 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
ATP5C1-201ENST00000335698 WWC3Q9ULE0 1092 aa17.2■□□□□ 0.34
ATP5C1-201ENST00000335698 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
ATP5C1-201ENST00000335698 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
ATP5C1-201ENST00000335698 TNFRSF10AO00220 468 aa17.19■□□□□ 0.34
ATP5C1-201ENST00000335698 PDE8AO60658 829 aa17.19■□□□□ 0.34
ATP5C1-201ENST00000335698 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
ATP5C1-201ENST00000335698 MS4A1P11836 297 aa17.19■□□□□ 0.34
ATP5C1-201ENST00000335698 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
ATP5C1-201ENST00000335698 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
ATP5C1-201ENST00000335698 SRCAPQ6ZRS2 3230 aa17.19■□□□□ 0.34
ATP5C1-201ENST00000335698 MASTLQ96GX5 879 aa17.18■□□□□ 0.34
ATP5C1-201ENST00000335698 PIM2Q9P1W9 311 aa17.18■□□□□ 0.34
ATP5C1-201ENST00000335698 RIC1Q4ADV7 1423 aa17.18■□□□□ 0.34
ATP5C1-201ENST00000335698 UTYO14607 1347 aa17.18■□□□□ 0.34
ATP5C1-201ENST00000335698 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
ATP5C1-201ENST00000335698 NPR1P16066 1061 aa17.17■□□□□ 0.34
ATP5C1-201ENST00000335698 SF3B3Q15393 1217 aaKnown RBP17.17■□□□□ 0.34
ATP5C1-201ENST00000335698 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
ATP5C1-201ENST00000335698 RPGRQ92834 1020 aaKnown RBP17.17■□□□□ 0.34
ATP5C1-201ENST00000335698 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 STYK1Q6J9G0 422 aa17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 RBM17Q96I25 401 aaKnown RBP17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 SPSB2Q99619 263 aa17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
ATP5C1-201ENST00000335698 TESPA1A2RU30 521 aaPredicted RBP17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 FAM187AA6NFU0 413 aa17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 RRP1P56182 461 aaKnown RBP17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 FOXO4P98177 505 aa17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 TTLL6Q8N841 843 aa17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 TTLL11Q8NHH1 800 aa17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 MEIS3Q99687 375 aa17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 DDX60Q8IY21 1712 aaKnown RBP17.15■□□□□ 0.34
ATP5C1-201ENST00000335698 UBTFL1P0CB47 393 aaPredicted RBP17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 CTSWP56202 376 aa17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 CRAMP1Q96RY5 1269 aa17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
ATP5C1-201ENST00000335698 CSF1RP07333 972 aa17.13■□□□□ 0.33
ATP5C1-201ENST00000335698 GNAI3P08754 354 aa17.13■□□□□ 0.33
ATP5C1-201ENST00000335698 CCDC152Q4G0S7 254 aa17.13■□□□□ 0.33
ATP5C1-201ENST00000335698 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
ATP5C1-201ENST00000335698 DDX46Q7L014 1031 aaKnown RBP17.13■□□□□ 0.33
ATP5C1-201ENST00000335698 ZBTB7BO15156 539 aaPredicted RBP17.12■□□□□ 0.33
ATP5C1-201ENST00000335698 FECHP22830 423 aa17.12■□□□□ 0.33
ATP5C1-201ENST00000335698 GPR162Q16538 588 aa17.12■□□□□ 0.33
ATP5C1-201ENST00000335698 SEC31BQ9NQW1 1179 aa17.12■□□□□ 0.33
ATP5C1-201ENST00000335698 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
ATP5C1-201ENST00000335698 LAMB2P55268 1798 aa17.11■□□□□ 0.33
ATP5C1-201ENST00000335698 POTECB2RU33 542 aa17.11■□□□□ 0.33
ATP5C1-201ENST00000335698 GPR37O15354 613 aa17.11■□□□□ 0.33
ATP5C1-201ENST00000335698 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
ATP5C1-201ENST00000335698 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
ATP5C1-201ENST00000335698 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
ATP5C1-201ENST00000335698 GREM2Q9H772 168 aa17.11■□□□□ 0.33
ATP5C1-201ENST00000335698 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
ATP5C1-201ENST00000335698 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.331e-7■□□□□ 10.5
ATP5C1-201ENST00000335698 GRAPQ13588 217 aa17.1■□□□□ 0.33
ATP5C1-201ENST00000335698 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
ATP5C1-201ENST00000335698 DAXXQ9UER7 740 aaPredicted RBP17.1■□□□□ 0.33
ATP5C1-201ENST00000335698 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
ATP5C1-201ENST00000335698 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
ATP5C1-201ENST00000335698 C21orf2O43822 256 aa17.09■□□□□ 0.33
ATP5C1-201ENST00000335698 BBOX1O75936 387 aa17.09■□□□□ 0.33
ATP5C1-201ENST00000335698 MORN1Q5T089 497 aa17.09■□□□□ 0.33
ATP5C1-201ENST00000335698 ANKRD44Q8N8A2 993 aa17.09■□□□□ 0.33
ATP5C1-201ENST00000335698 CELF1Q92879 486 aaKnown RBP17.09■□□□□ 0.33
ATP5C1-201ENST00000335698 PKD2L1Q9P0L9 805 aa17.09■□□□□ 0.33
ATP5C1-201ENST00000335698 DLEC1Q9Y238 1755 aa17.08■□□□□ 0.33
ATP5C1-201ENST00000335698 GNAI2P04899 355 aa17.08■□□□□ 0.32
ATP5C1-201ENST00000335698 ITGA6P23229 1130 aa17.08■□□□□ 0.32
ATP5C1-201ENST00000335698 RPS8P62241 208 aaKnown RBP17.08■□□□□ 0.32
ATP5C1-201ENST00000335698 RABL6Q3YEC7 729 aaPredicted RBP17.08■□□□□ 0.32
ATP5C1-201ENST00000335698 C7orf43Q8WVR3 580 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms