RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SF3A1Q15459 793 aaKnown RBP19.44■□□□□ 0.7
SSH1-201ENST00000326470 POLR3EQ9NVU0 708 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 PAG1Q9NWQ8 432 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 GOLIM4O00461 696 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 EVCP57679 992 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 NLRP12P59046 1061 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 NCAPHQ15003 741 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 LRP10Q7Z4F1 713 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 CLIC4Q9Y696 253 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 A0A0G2JLW4 131 aa19.43■□□□□ 0.7
SSH1-201ENST00000326470 SLC3A2P08195 630 aaKnown RBP19.43■□□□□ 0.7
SSH1-201ENST00000326470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.43■□□□□ 0.7
SSH1-201ENST00000326470 CHST3Q7LGC8 479 aa19.43■□□□□ 0.7
SSH1-201ENST00000326470 C5P01031 1676 aa19.42■□□□□ 0.7
SSH1-201ENST00000326470 SPTLC2O15270 562 aa19.42■□□□□ 0.7
SSH1-201ENST00000326470 LRRN4CLQ8ND94 238 aa19.42■□□□□ 0.7
SSH1-201ENST00000326470 ESCO1Q5FWF5 840 aa19.42■□□□□ 0.7
SSH1-201ENST00000326470 SLC52A2Q9HAB3 445 aa19.42■□□□□ 0.7
SSH1-201ENST00000326470 CCP110O43303 1012 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 ZNF202O95125 648 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 ETF1P62495 437 aaKnown RBP19.41■□□□□ 0.7
SSH1-201ENST00000326470 ST7Q9NRC1 585 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 FHOD1Q9Y613 1164 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 CAMTA1Q9Y6Y1 1673 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 A0A087WZG4 1122 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 CLCN6P51797 869 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 BRAPQ7Z569 592 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 PROSER2Q86WR7 435 aaPredicted RBP19.41■□□□□ 0.7
SSH1-201ENST00000326470 SYTL4Q96C24 671 aaPredicted RBP19.41■□□□□ 0.7
SSH1-201ENST00000326470 C8orf76Q96K31 380 aa19.41■□□□□ 0.7
SSH1-201ENST00000326470 CCDC9Q9Y3X0 531 aaKnown RBP19.41■□□□□ 0.7
SSH1-201ENST00000326470 MAST3O60307 1309 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 PHLPP2Q6ZVD8 1323 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 BIN1O00499 593 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 IKBKBO14920 756 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 POLR3DP05423 398 aaPredicted RBP19.4■□□□□ 0.7
SSH1-201ENST00000326470 CASP7P55210 303 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 MYSM1Q5VVJ2 828 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 OTUD7BQ6GQQ9 843 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 FBXO18Q8NFZ0 1043 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 NEUROD6Q96NK8 337 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 FMNL2Q96PY5 1086 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 FANCCQ00597 558 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 ARHGAP29Q52LW3 1261 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 GPR108Q9NPR9 543 aa19.4■□□□□ 0.7
SSH1-201ENST00000326470 LMBR1LQ6UX01 489 aa19.39■□□□□ 0.69
SSH1-201ENST00000326470 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
SSH1-201ENST00000326470 ZNF496Q96IT1 587 aaPredicted RBP19.39■□□□□ 0.69
SSH1-201ENST00000326470 RNF113AO15541 343 aaKnown RBP19.39■□□□□ 0.69
SSH1-201ENST00000326470 CMA1P23946 247 aa19.39■□□□□ 0.69
SSH1-201ENST00000326470 AXDND1Q5T1B0 1012 aaPredicted RBP19.39■□□□□ 0.69
SSH1-201ENST00000326470 ATG9AQ7Z3C6 839 aa19.39■□□□□ 0.69
SSH1-201ENST00000326470 NOL10Q9BSC4 688 aaKnown RBP19.39■□□□□ 0.69
SSH1-201ENST00000326470 SLIT3O75094 1523 aa19.38■□□□□ 0.69
SSH1-201ENST00000326470 DHX16O60231 1041 aaKnown RBP19.38■□□□□ 0.69
SSH1-201ENST00000326470 LMOD1P29536 600 aaPredicted RBP19.38■□□□□ 0.69
SSH1-201ENST00000326470 AXIN2Q9Y2T1 843 aa19.38■□□□□ 0.69
SSH1-201ENST00000326470 ATP5J2-PTCD1G3V325 749 aa19.37■□□□□ 0.69
SSH1-201ENST00000326470 PTCD1O75127 700 aaKnown RBP19.37■□□□□ 0.69
SSH1-201ENST00000326470 PNMA6AP0CW24 399 aaPredicted RBP19.37■□□□□ 0.69
SSH1-201ENST00000326470 TTLL5Q6EMB2 1281 aa19.37■□□□□ 0.69
SSH1-201ENST00000326470 SYNE3Q6ZMZ3 975 aa19.37■□□□□ 0.69
SSH1-201ENST00000326470 NFATC2IPQ8NCF5 419 aa19.37■□□□□ 0.69
SSH1-201ENST00000326470 HSD3B7Q9H2F3 369 aa19.37■□□□□ 0.69
SSH1-201ENST00000326470 GPHNQ9NQX3 736 aaPredicted RBP19.37■□□□□ 0.69
SSH1-201ENST00000326470 SNRPA1P09661 255 aaKnown RBP19.37■□□□□ 0.69
SSH1-201ENST00000326470 PFKFB1P16118 471 aa19.37■□□□□ 0.69
SSH1-201ENST00000326470 ANO1Q5XXA6 986 aa19.37■□□□□ 0.69
SSH1-201ENST00000326470 SRRTQ9BXP5 876 aaKnown RBP19.37■□□□□ 0.69
SSH1-201ENST00000326470 ORC3Q9UBD5 711 aaPredicted RBP19.37■□□□□ 0.69
SSH1-201ENST00000326470 DNAI1Q9UI46 699 aa19.37■□□□□ 0.69
SSH1-201ENST00000326470 KDM6AO15550 1401 aaPredicted RBP19.37■□□□□ 0.69
SSH1-201ENST00000326470 ZRANB2O95218 330 aaKnown RBP eCLIP19.36■□□□□ 0.69
SSH1-201ENST00000326470 TIMM10P62072 90 aa19.36■□□□□ 0.69
SSH1-201ENST00000326470 TRIM65Q6PJ69 517 aa19.36■□□□□ 0.69
SSH1-201ENST00000326470 UBXN4Q92575 508 aa19.36■□□□□ 0.69
SSH1-201ENST00000326470 TIGD1Q96MW7 591 aa19.36■□□□□ 0.69
SSH1-201ENST00000326470 TMX1Q9H3N1 280 aa19.36■□□□□ 0.69
SSH1-201ENST00000326470 A0A0U1RQG5 324 aaPredicted RBP19.36■□□□□ 0.69
SSH1-201ENST00000326470 ATP1A3P13637 1013 aa19.36■□□□□ 0.69
SSH1-201ENST00000326470 PIP4K2AP48426 406 aaPredicted RBP19.36■□□□□ 0.69
SSH1-201ENST00000326470 FOXO4P98177 505 aa19.36■□□□□ 0.69
SSH1-201ENST00000326470 ARGLU1Q9NWB6 273 aaPredicted RBP19.36■□□□□ 0.69
SSH1-201ENST00000326470 AFDNP55196 1824 aaKnown RBP19.36■□□□□ 0.69
SSH1-201ENST00000326470 M0R2C6 588 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 PLA2G4AP47712 749 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 TUBE1Q9UJT0 475 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 HPS5Q9UPZ3 1129 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 KIF28PB7ZC32 967 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 CBFA2T2O43439 604 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 IFIT1P09914 478 aaKnown RBP19.35■□□□□ 0.69
SSH1-201ENST00000326470 CYP2C19P33261 490 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 IL15P40933 162 aaPredicted RBP19.35■□□□□ 0.69
SSH1-201ENST00000326470 C19orf44Q9H6X5 657 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 CALCOCO1Q9P1Z2 691 aa19.35■□□□□ 0.69
SSH1-201ENST00000326470 UBASH3AP57075 661 aa19.34■□□□□ 0.69
SSH1-201ENST00000326470 KIF23Q02241 960 aaPredicted RBP19.34■□□□□ 0.69
SSH1-201ENST00000326470 TMCO3Q6UWJ1 677 aa19.34■□□□□ 0.69
SSH1-201ENST00000326470 TMEM94Q12767 1356 aa19.34■□□□□ 0.69
SSH1-201ENST00000326470 KLF18A0A0U1RQI7 1052 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms