RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RSPH14Q9UHP6 348 aa17.56■□□□□ 0.4
VARS2-201ENST00000321897 ADGRB3O60242 1522 aa17.56■□□□□ 0.4
VARS2-201ENST00000321897 ANKIB1Q9P2G1 1089 aa17.56■□□□□ 0.4
VARS2-201ENST00000321897 ALKQ9UM73 1620 aa17.56■□□□□ 0.4
VARS2-201ENST00000321897 CYP21A2P08686 494 aa17.56■□□□□ 0.4
VARS2-201ENST00000321897 SSRP1Q08945 709 aaKnown RBP17.56■□□□□ 0.4
VARS2-201ENST00000321897 WWC3Q9ULE0 1092 aa17.56■□□□□ 0.4
VARS2-201ENST00000321897 GPAA1O43292 621 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 SPTLC2O15270 562 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 CASQ1P31415 396 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 JAKMIP3Q5VZ66 844 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 KRBA2Q6ZNG9 492 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 TRMT1LQ7Z2T5 733 aaKnown RBP17.55■□□□□ 0.4
VARS2-201ENST00000321897 GPIHBP1Q8IV16 184 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 ZSCAN16Q9H4T2 348 aaPredicted RBP17.55■□□□□ 0.4
VARS2-201ENST00000321897 IGKV5-2P06315 115 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 ZNF75DP51815 510 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 ENOX2Q16206 610 aaKnown RBP17.55■□□□□ 0.4
VARS2-201ENST00000321897 UTP14CQ5TAP6 766 aaKnown RBP17.55■□□□□ 0.4
VARS2-201ENST00000321897 CCDC70Q6NSX1 233 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 PPFIBP1Q86W92 1011 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 KIAA1524Q8TCG1 905 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 IFNKQ9P0W0 207 aa17.55■□□□□ 0.4
VARS2-201ENST00000321897 CPS1P31327 1500 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 EIF3JO75822 258 aaKnown RBP17.54■□□□□ 0.4
VARS2-201ENST00000321897 DNA2P51530 1060 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 USP28Q96RU2 1077 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 ARMT1Q9H993 441 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 ASAP1Q9ULH1 1129 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 STX8Q9UNK0 236 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 CDK12Q9NYV4 1490 aaPredicted RBP17.54■□□□□ 0.4
VARS2-201ENST00000321897 NEMFO60524 1076 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 ADD1P35611 737 aaKnown RBP17.54■□□□□ 0.4
VARS2-201ENST00000321897 GABPB1Q06547 395 aaPredicted RBP17.54■□□□□ 0.4
VARS2-201ENST00000321897 PLIN2Q99541 437 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 ERLIN1O75477 346 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 MBD4O95243 580 aa17.54■□□□□ 0.4
VARS2-201ENST00000321897 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
VARS2-201ENST00000321897 HOXB7P09629 217 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 CTDSPL2Q05D32 466 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 STAMQ92783 540 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 GTF2A1P52655 376 aaPredicted RBP17.53■□□□□ 0.4
VARS2-201ENST00000321897 MKNK2Q9HBH9 465 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 ZSWIM6Q9HCJ5 1215 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 E7EWF7 191 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 CAVIN4Q5BKX8 364 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 PTPRMP28827 1452 aa17.53■□□□□ 0.4
VARS2-201ENST00000321897 ZSCAN20P17040 1043 aaPredicted RBP17.52■□□□□ 0.4
VARS2-201ENST00000321897 GSDMDP57764 484 aa17.52■□□□□ 0.4
VARS2-201ENST00000321897 ARFGAP3Q9NP61 516 aa17.52■□□□□ 0.4
VARS2-201ENST00000321897 CAPN2P17655 700 aa17.52■□□□□ 0.4
VARS2-201ENST00000321897 IRX3P78415 501 aaPredicted RBP17.52■□□□□ 0.4
VARS2-201ENST00000321897 KARSQ15046 597 aaKnown RBP17.52■□□□□ 0.4
VARS2-201ENST00000321897 WTAPQ15007 396 aa17.52■□□□□ 0.39
VARS2-201ENST00000321897 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.39
VARS2-201ENST00000321897 FILIP1LQ4L180 1135 aa17.52■□□□□ 0.39
VARS2-201ENST00000321897 POLR1AO95602 1720 aaPredicted RBP17.51■□□□□ 0.39
VARS2-201ENST00000321897 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
VARS2-201ENST00000321897 UIMC1Q96RL1 719 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 MAP4K1Q92918 833 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 ERO1AQ96HE7 468 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 CARD6Q9BX69 1037 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 KCNJ14Q9UNX9 436 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 UBASH3AP57075 661 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 NLRP5P59047 1200 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 CUL4AQ13619 759 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 RABEP2Q9H5N1 569 aa17.51■□□□□ 0.39
VARS2-201ENST00000321897 TSPY2A6NKD2 308 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 VPS18Q9P253 973 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 PUF60Q9UHX1 559 aaKnown RBP17.5■□□□□ 0.39
VARS2-201ENST00000321897 ARHGEF40Q8TER5 1519 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 F8W031 263 aaPredicted RBP17.5■□□□□ 0.39
VARS2-201ENST00000321897 HSPD1P10809 573 aaKnown RBP17.5■□□□□ 0.39
VARS2-201ENST00000321897 ATP5JP18859 108 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 SCRN1Q12765 414 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
VARS2-201ENST00000321897 IQCA1Q86XH1 822 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 DHX58Q96C10 678 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 PRDM4Q9UKN5 801 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 ZSCAN12O43309 604 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 RBM5P52756 815 aaKnown RBP eCLIP17.5■□□□□ 0.39
VARS2-201ENST00000321897 ARID5BQ14865 1188 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 CCDC102BQ68D86 513 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 CTCFLQ8NI51 663 aaPredicted RBP17.5■□□□□ 0.39
VARS2-201ENST00000321897 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
VARS2-201ENST00000321897 MAPK8IP1Q9UQF2 711 aa17.5■□□□□ 0.39
VARS2-201ENST00000321897 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
VARS2-201ENST00000321897 CYP27B1O15528 508 aa17.49■□□□□ 0.39
VARS2-201ENST00000321897 CBFA2T2O43439 604 aa17.49■□□□□ 0.39
VARS2-201ENST00000321897 RDXP35241 583 aaKnown RBP17.49■□□□□ 0.39
VARS2-201ENST00000321897 TXLNAP40222 546 aa17.49■□□□□ 0.39
VARS2-201ENST00000321897 ZSCAN29Q8IWY8 852 aaPredicted RBP17.49■□□□□ 0.39
VARS2-201ENST00000321897 CACTINQ8WUQ7 758 aaKnown RBP17.49■□□□□ 0.39
VARS2-201ENST00000321897 AIFM3Q96NN9 605 aa17.49■□□□□ 0.39
VARS2-201ENST00000321897 EVCP57679 992 aa17.49■□□□□ 0.39
VARS2-201ENST00000321897 TANGO6Q9C0B7 1094 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms