RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 KCNB2Q92953 911 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 NLRP3Q96P20 1036 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 TNRC6CQ9HCJ0 1690 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 CYP2D7A0A087X1C5 515 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 HIP1O00291 1037 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 TRAK2O60296 914 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 RPS6KB1P23443 525 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 TPTE2Q6XPS3 522 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 SDR42E1Q8WUS8 393 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 CHMP4CQ96CF2 233 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 FAM84BQ96KN1 310 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 LIMCH1Q9UPQ0 1083 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 TCRBV5S4A2TA0A5A2 114 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 E7EWF7 191 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 SLC5A1P13866 664 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 ADD2P35612 726 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 LCORLQ8N3X6 602 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 MBD4O95243 580 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 ARID4AP29374 1257 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 SF3B3Q15393 1217 aaKnown RBP8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 COL23A1Q86Y22 540 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 NEK1Q96PY6 1258 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 EPB41L4AQ9HCS5 686 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 RBM27Q9P2N5 1060 aaKnown RBP8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 UBE2Q2LH0YL09 131 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 GJB2P29033 226 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 GSE1Q14687 1217 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 ANO8Q9HCE9 1232 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 GJB4Q9NTQ9 266 aa8.35□□□□□ -1.07
LYSMD3-201ENST00000315948 PRPF40AO75400 957 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 PRDX5P30044 214 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 DYNLL1P63167 89 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 ZNF219Q9P2Y4 722 aaPredicted RBP8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 BCORQ6W2J9 1755 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 SERPINB2P05120 415 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 SYT1P21579 422 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 CDC5LQ99459 802 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 HELLSQ9NRZ9 838 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 BSDC1Q9NW68 430 aaPredicted RBP8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 C4AP0C0L4 1744 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 EN1Q05925 392 aaPredicted RBP8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 APPBP2Q92624 585 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 LRP2BPQ9P2M1 347 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 FBXO3Q9UK99 471 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 LRP5O75197 1615 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 NCLP19338 710 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 RBM6P78332 1123 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 VPS37DQ86XT2 251 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 CCDC144CPQ8IYA2 1237 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 ZKSCAN3Q9BRR0 538 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 MYL10Q9BUA6 226 aa8.34□□□□□ -1.07
LYSMD3-201ENST00000315948 GADD45BO75293 160 aaPredicted RBP8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 HSP90B1P14625 803 aaKnown RBP8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 VPS37CA5D8V6 355 aaPredicted RBP8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 ANTXR2P58335 489 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 FGD1P98174 961 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 SLC10A5Q5PT55 438 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 RAI14Q9P0K7 980 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 SCRN1Q12765 414 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 EZH2Q15910 746 aaKnown RBP8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 CDC37L1Q7L3B6 337 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 DEFB132Q7Z7B7 95 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 U3KPZ7 1027 aaPredicted RBP8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 LY75O60449 1722 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 NEDD4P46934 1319 aa8.33□□□□□ -1.08
LYSMD3-201ENST00000315948 SCN7AQ01118 1682 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 BRD1O95696 1058 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 GUCY1B3Q02153 619 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 RNF20Q5VTR2 975 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 OTUD7BQ6GQQ9 843 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 GAS2L3Q86XJ1 694 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 AIDAQ96BJ3 306 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 STRBPQ96SI9 672 aaKnown RBP8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 B4E1Z4 1266 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 POLRMTO00411 1230 aaKnown RBP8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 PRDM1O75626 825 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 RXRBP28702 533 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 GPT2Q8TD30 523 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 MXD3Q9BW11 206 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 BRPF3Q9ULD4 1205 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 CIZ1Q9ULV3 898 aaPredicted RBP8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 CNPY2Q9Y2B0 182 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 CASZ1Q86V15 1759 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 LAMB2P55268 1798 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 GPSM2P81274 684 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 DIXDC1Q155Q3 683 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 DSCC1Q9BVC3 393 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 LMBRD1Q9NUN5 540 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 SMC3Q9UQE7 1217 aa8.32□□□□□ -1.08
LYSMD3-201ENST00000315948 CTDNEP1O95476 244 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms