RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 LRRC24Q50LG9 513 aa17.35■□□□□ 0.37
TFE3-201ENST00000315869 TMC6Q7Z403 805 aa17.35■□□□□ 0.37
TFE3-201ENST00000315869 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
TFE3-201ENST00000315869 C5P01031 1676 aa17.35■□□□□ 0.37
TFE3-201ENST00000315869 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
TFE3-201ENST00000315869 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
TFE3-201ENST00000315869 ORC3Q9UBD5 711 aaPredicted RBP17.35■□□□□ 0.37
TFE3-201ENST00000315869 GOLGA8BA8MQT2 603 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 MARCKSP29966 332 aaPredicted RBP17.34■□□□□ 0.37
TFE3-201ENST00000315869 MRPS27Q92552 414 aaKnown RBP17.34■□□□□ 0.37
TFE3-201ENST00000315869 ATG3Q9NT62 314 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 ERVV-2B6SEH9 535 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 NRDCO43847 1150 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
TFE3-201ENST00000315869 ZSCAN20P17040 1043 aaPredicted RBP17.34■□□□□ 0.37
TFE3-201ENST00000315869 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 PAXBP1Q9Y5B6 917 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 KLF18A0A0U1RQI7 1052 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 USPL1Q5W0Q7 1092 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 RCOR1Q9UKL0 485 aa17.34■□□□□ 0.37
TFE3-201ENST00000315869 ZNF215Q9UL58 517 aaPredicted RBP17.34■□□□□ 0.37
TFE3-201ENST00000315869 CTDNEP1O95476 244 aa17.33■□□□□ 0.37
TFE3-201ENST00000315869 RXRAP19793 462 aa17.33■□□□□ 0.37
TFE3-201ENST00000315869 IQCB1Q15051 598 aa17.33■□□□□ 0.37
TFE3-201ENST00000315869 TSGA10IPQ3SY00 556 aa17.33■□□□□ 0.37
TFE3-201ENST00000315869 TTC39AQ5SRH9 613 aa17.33■□□□□ 0.37
TFE3-201ENST00000315869 C8orf37Q96NL8 207 aa17.33■□□□□ 0.37
TFE3-201ENST00000315869 IFNKQ9P0W0 207 aa17.33■□□□□ 0.37
TFE3-201ENST00000315869 PCDHA7Q9UN72 937 aa17.33■□□□□ 0.37
TFE3-201ENST00000315869 CAVIN2O95810 425 aa17.33■□□□□ 0.36
TFE3-201ENST00000315869 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.36
TFE3-201ENST00000315869 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
TFE3-201ENST00000315869 PDIA3P30101 505 aaKnown RBP17.33■□□□□ 0.36
TFE3-201ENST00000315869 HSP90AA4PQ58FG1 418 aa17.33■□□□□ 0.36
TFE3-201ENST00000315869 NAA16Q6N069 864 aaPredicted RBP17.33■□□□□ 0.36
TFE3-201ENST00000315869 FAM177A1Q8N128 213 aaPredicted RBP17.33■□□□□ 0.36
TFE3-201ENST00000315869 SLC4A9Q96Q91 983 aa17.33■□□□□ 0.36
TFE3-201ENST00000315869 PUS3Q9BZE2 481 aaKnown RBP17.33■□□□□ 0.36
TFE3-201ENST00000315869 UTYO14607 1347 aa17.32■□□□□ 0.36
TFE3-201ENST00000315869 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
TFE3-201ENST00000315869 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
TFE3-201ENST00000315869 RFX5P48382 616 aaPredicted RBP17.32■□□□□ 0.36
TFE3-201ENST00000315869 TPM4P67936 248 aa17.32■□□□□ 0.36
TFE3-201ENST00000315869 SCN11AQ9UI33 1791 aa17.32■□□□□ 0.36
TFE3-201ENST00000315869 DMTNQ08495 405 aa17.32■□□□□ 0.36
TFE3-201ENST00000315869 KIF18AQ8NI77 898 aa17.32■□□□□ 0.36
TFE3-201ENST00000315869 LLPHQ9BRT6 129 aaKnown RBP17.32■□□□□ 0.36
TFE3-201ENST00000315869 SLC3A2P08195 630 aaKnown RBP17.31■□□□□ 0.36
TFE3-201ENST00000315869 NDUFA8P51970 172 aa17.31■□□□□ 0.36
TFE3-201ENST00000315869 HLFQ16534 295 aa17.31■□□□□ 0.36
TFE3-201ENST00000315869 PTPN21Q16825 1174 aa17.31■□□□□ 0.36
TFE3-201ENST00000315869 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
TFE3-201ENST00000315869 TUBGCP6Q96RT7 1819 aa17.31■□□□□ 0.36
TFE3-201ENST00000315869 ZBTB1Q9Y2K1 713 aa17.31■□□□□ 0.36
TFE3-201ENST00000315869 IMMTQ16891 758 aaKnown RBP17.31■□□□□ 0.36
TFE3-201ENST00000315869 DPCR1Q3MIW9 517 aa17.31■□□□□ 0.36
TFE3-201ENST00000315869 CCDC158Q5M9N0 1113 aa17.31■□□□□ 0.36
TFE3-201ENST00000315869 RBM43Q6ZSC3 357 aaKnown RBP17.31■□□□□ 0.36
TFE3-201ENST00000315869 ALDH8A1Q9H2A2 487 aaPredicted RBP17.31■□□□□ 0.36
TFE3-201ENST00000315869 CWC25Q9NXE8 425 aaPredicted RBP17.31■□□□□ 0.36
TFE3-201ENST00000315869 RNF113AO15541 343 aaKnown RBP17.3■□□□□ 0.36
TFE3-201ENST00000315869 KCNQ2O43526 872 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 SFPQP23246 707 aaKnown RBP eCLIP17.3■□□□□ 0.36
TFE3-201ENST00000315869 PRC1O43663 620 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 ELF2Q15723 593 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 FAM98CQ17RN3 349 aaKnown RBP17.3■□□□□ 0.36
TFE3-201ENST00000315869 CCDC57Q2TAC2 916 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 CGNQ9P2M7 1197 aaKnown RBP17.3■□□□□ 0.36
TFE3-201ENST00000315869 MAST3O60307 1309 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 ANKRD7Q92527 254 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 MRFAP1L1Q96HT8 127 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 TOMM22Q9NS69 142 aa17.3■□□□□ 0.36
TFE3-201ENST00000315869 SPTLC2O15270 562 aa17.29■□□□□ 0.36
TFE3-201ENST00000315869 CTIFO43310 598 aaKnown RBP17.29■□□□□ 0.36
TFE3-201ENST00000315869 ADD1P35611 737 aaKnown RBP17.29■□□□□ 0.36
TFE3-201ENST00000315869 XPO4Q9C0E2 1151 aaKnown RBP17.29■□□□□ 0.36
TFE3-201ENST00000315869 M0R2C6 588 aa17.29■□□□□ 0.36
TFE3-201ENST00000315869 NEMFO60524 1076 aa17.29■□□□□ 0.36
TFE3-201ENST00000315869 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
TFE3-201ENST00000315869 TRDNQ13061 729 aa17.29■□□□□ 0.36
TFE3-201ENST00000315869 SNW1Q13573 536 aaKnown RBP17.29■□□□□ 0.36
TFE3-201ENST00000315869 HELLSQ9NRZ9 838 aa17.29■□□□□ 0.36
TFE3-201ENST00000315869 DDB1Q16531 1140 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 PI16Q6UXB8 463 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 SYT10Q6XYQ8 523 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 SERPINC1P01008 464 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 IL15P40933 162 aaPredicted RBP17.28■□□□□ 0.36
TFE3-201ENST00000315869 NFXL1Q6ZNB6 911 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 TMX1Q9H3N1 280 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 ZMYM1Q5SVZ6 1142 aa17.28■□□□□ 0.36
TFE3-201ENST00000315869 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
TFE3-201ENST00000315869 DHX16O60231 1041 aaKnown RBP17.27■□□□□ 0.36
TFE3-201ENST00000315869 ADORA1P30542 326 aa17.27■□□□□ 0.36
TFE3-201ENST00000315869 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.36
TFE3-201ENST00000315869 PTF1AQ7RTS3 328 aa17.27■□□□□ 0.36
TFE3-201ENST00000315869 DSCC1Q9BVC3 393 aa17.27■□□□□ 0.36
TFE3-201ENST00000315869 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms