RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 GIGYF2Q6Y7W6 1299 aaKnown RBP17.37■□□□□ 0.37
LEMD3-201ENST00000308330 SNX21Q969T3 373 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 TPD52L2O43399 206 aaKnown RBP17.37■□□□□ 0.37
LEMD3-201ENST00000308330 PCK1P35558 622 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 KIF2CQ99661 725 aa17.37■□□□□ 0.37
LEMD3-201ENST00000308330 TBC1D31Q96DN5 1066 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 UGGT1Q9NYU2 1555 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 EFCAB6Q5THR3 1501 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 TRIM66O15016 1216 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 CWF19L2Q2TBE0 894 aaKnown RBP17.36■□□□□ 0.37
LEMD3-201ENST00000308330 ARHGAP45Q92619 1136 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 CARD10Q9BWT7 1032 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 ZC3H12CQ9C0D7 883 aaKnown RBP17.36■□□□□ 0.37
LEMD3-201ENST00000308330 EIF3CLB5ME19 914 aaKnown RBP17.36■□□□□ 0.37
LEMD3-201ENST00000308330 TXLNAP40222 546 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 EIF3CQ99613 913 aaKnown RBP17.36■□□□□ 0.37
LEMD3-201ENST00000308330 QTRT2Q9H974 415 aaKnown RBP17.36■□□□□ 0.37
LEMD3-201ENST00000308330 ZNF215Q9UL58 517 aaPredicted RBP17.36■□□□□ 0.37
LEMD3-201ENST00000308330 ARHGEF5Q12774 1597 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 PCMTD1Q96MG8 357 aaPredicted RBP17.36■□□□□ 0.37
LEMD3-201ENST00000308330 DDX21Q9NR30 783 aaKnown RBP eCLIP17.36■□□□□ 0.37
LEMD3-201ENST00000308330 TTC37Q6PGP7 1564 aa17.36■□□□□ 0.37
LEMD3-201ENST00000308330 PIK3C2GO75747 1445 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 WDHD1O75717 1129 aaPredicted RBP17.35■□□□□ 0.37
LEMD3-201ENST00000308330 TADA2BQ86TJ2 420 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 MORC2Q9Y6X9 1032 aaPredicted RBP17.35■□□□□ 0.37
LEMD3-201ENST00000308330 SAMD9LQ8IVG5 1584 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 GYS2P54840 703 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 MXRA7P84157 204 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 PPFIBP1Q86W92 1011 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 ZNF444Q8N0Y2 327 aaPredicted RBP17.35■□□□□ 0.37
LEMD3-201ENST00000308330 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
LEMD3-201ENST00000308330 RANBP6O60518 1105 aaKnown RBP17.35■□□□□ 0.37
LEMD3-201ENST00000308330 VAMP4O75379 141 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 BAG6P46379 1132 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 MAP7D1Q3KQU3 841 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 CCDC150Q8NCX0 1101 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 VCXQ9H320 206 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 ZCCHC11Q5TAX3 1644 aaKnown RBP17.35■□□□□ 0.37
LEMD3-201ENST00000308330 FAM200AQ8TCP9 573 aa17.35■□□□□ 0.37
LEMD3-201ENST00000308330 RPSAP08865 295 aaKnown RBP17.34■□□□□ 0.37
LEMD3-201ENST00000308330 RNF217Q8TC41 542 aa17.34■□□□□ 0.37
LEMD3-201ENST00000308330 EXOC4Q96A65 974 aa17.34■□□□□ 0.37
LEMD3-201ENST00000308330 GDPD2Q9HCC8 539 aa17.34■□□□□ 0.37
LEMD3-201ENST00000308330 TPX2Q9ULW0 747 aaKnown RBP17.34■□□□□ 0.37
LEMD3-201ENST00000308330 A1BGP04217 495 aa17.34■□□□□ 0.37
LEMD3-201ENST00000308330 CEBPZQ03701 1054 aaKnown RBP17.34■□□□□ 0.37
LEMD3-201ENST00000308330 DNAJC10Q8IXB1 793 aa17.34■□□□□ 0.37
LEMD3-201ENST00000308330 TTC19Q6DKK2 380 aaPredicted RBP17.34■□□□□ 0.37
LEMD3-201ENST00000308330 LUC7L2Q9Y383 392 aaKnown RBP17.34■□□□□ 0.37
LEMD3-201ENST00000308330 OPA1O60313 960 aa17.33■□□□□ 0.37
LEMD3-201ENST00000308330 ZNF165P49910 485 aa17.33■□□□□ 0.37
LEMD3-201ENST00000308330 CCDC12Q8WUD4 166 aaPredicted RBP17.33■□□□□ 0.37
LEMD3-201ENST00000308330 BAG3O95817 575 aa17.33■□□□□ 0.37
LEMD3-201ENST00000308330 DESP17661 470 aa17.33■□□□□ 0.37
LEMD3-201ENST00000308330 CCDC38Q502W7 563 aa17.33■□□□□ 0.37
LEMD3-201ENST00000308330 OGFOD1Q8N543 542 aa17.33■□□□□ 0.37
LEMD3-201ENST00000308330 KCNG1Q9UIX4 513 aa17.33■□□□□ 0.37
LEMD3-201ENST00000308330 ZEB2O60315 1214 aa17.33■□□□□ 0.36
LEMD3-201ENST00000308330 DAAM2Q86T65 1068 aa17.33■□□□□ 0.36
LEMD3-201ENST00000308330 TEX11Q8IYF3 940 aa17.33■□□□□ 0.36
LEMD3-201ENST00000308330 HELBQ8NG08 1087 aaPredicted RBP17.33■□□□□ 0.36
LEMD3-201ENST00000308330 PHAXQ9H814 394 aaKnown RBP17.33■□□□□ 0.36
LEMD3-201ENST00000308330 TUBBP07437 444 aa17.33■□□□□ 0.36
LEMD3-201ENST00000308330 TUBB4BP68371 445 aa17.33■□□□□ 0.36
LEMD3-201ENST00000308330 SRLQ86TD4 932 aa17.33■□□□□ 0.36
LEMD3-201ENST00000308330 CDK5RAP3Q96JB5 506 aa17.33■□□□□ 0.36
LEMD3-201ENST00000308330 F8W031 263 aaPredicted RBP17.32■□□□□ 0.36
LEMD3-201ENST00000308330 SNCBQ16143 134 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 CCDC6Q16204 474 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 PRPF40BQ6NWY9 871 aaKnown RBP17.32■□□□□ 0.36
LEMD3-201ENST00000308330 GIMAP6Q6P9H5 292 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 RHPN1Q8TCX5 695 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
LEMD3-201ENST00000308330 CREB3O43889 395 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 STK38Q15208 465 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 CAND2O75155 1236 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 SH3BGRP55822 239 aaPredicted RBP17.32■□□□□ 0.36
LEMD3-201ENST00000308330 ISM2Q6H9L7 571 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 CCDC160A6NGH7 325 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 CHUKO15111 745 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 CYP2C19P33261 490 aa17.32■□□□□ 0.36
LEMD3-201ENST00000308330 SPTY2D1Q68D10 685 aaPredicted RBP17.32■□□□□ 0.36
LEMD3-201ENST00000308330 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
LEMD3-201ENST00000308330 CAVIN2O95810 425 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 ZBTB17Q13105 803 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 FILIP1LQ4L180 1135 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 TSHZ3Q63HK5 1081 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 IQCA1Q86XH1 822 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 CNBD1Q8NA66 436 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 CTNNBL1Q8WYA6 563 aaPredicted RBP17.31■□□□□ 0.36
LEMD3-201ENST00000308330 JDP2Q8WYK2 163 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 FAM89AQ96GI7 184 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 LRRD1A4D1F6 860 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 ZNF213O14771 459 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
LEMD3-201ENST00000308330 PPP1R12CQ9BZL4 782 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
LEMD3-201ENST00000308330 A6NNZ2 444 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms