RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CDHR2Q9BYE9 1310 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 RTL9Q8NET4 1388 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 CYP27B1O15528 508 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 TBC1D8O95759 1140 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 ANXA1P04083 346 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 SNRPA1P09661 255 aaKnown RBP6.41□□□□□ -1.38
VPS50-202ENST00000305866 ANTXR2P58335 489 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 IFNL2Q8IZJ0 200 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 TCEANC2Q96MN5 208 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 ORAI2Q96SN7 254 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 ISCA1Q9BUE6 129 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 CYP46A1Q9Y6A2 500 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 NHSQ6T4R5 1651 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 VWA3AA6NCI4 1184 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 TADA3O75528 432 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 C1orf141Q5JVX7 400 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 SPATA20Q8TB22 786 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 DPF2Q92785 391 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 LRRC59Q96AG4 307 aaKnown RBP6.41□□□□□ -1.38
VPS50-202ENST00000305866 C16orf45Q96MC5 204 aaPredicted RBP6.41□□□□□ -1.38
VPS50-202ENST00000305866 DOT1LQ8TEK3 1739 aa6.41□□□□□ -1.38
VPS50-202ENST00000305866 A0A1W2PQ27 194 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 A0A1W2PQ64 194 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 A0A1W2PQD8 194 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 MAP2K7O14733 419 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 IGSF3O75054 1194 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 CSF1RP07333 972 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 TNNT1P13805 278 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 CDC27P30260 824 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 PBX1P40424 430 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 CLCN6P51797 869 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 TNNI3KQ59H18 835 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 NT5DC1Q5TFE4 455 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 TMED8Q6PL24 325 aaPredicted RBP6.4□□□□□ -1.38
VPS50-202ENST00000305866 ZNF397Q8NF99 534 aaPredicted RBP6.4□□□□□ -1.38
VPS50-202ENST00000305866 ANP32BQ92688 251 aaKnown RBP6.4□□□□□ -1.38
VPS50-202ENST00000305866 SCAND2PQ9GZW5 306 aaPredicted RBP6.4□□□□□ -1.38
VPS50-202ENST00000305866 SEC31BQ9NQW1 1179 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 RTEL1Q9NZ71 1219 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 CGNQ9P2M7 1197 aaKnown RBP6.4□□□□□ -1.38
VPS50-202ENST00000305866 FPGT-TNNI3KV9GXZ4 949 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 RBBP6Q7Z6E9 1792 aaKnown RBP6.4□□□□□ -1.38
VPS50-202ENST00000305866 WDR17Q8IZU2 1322 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 PSDA5PKW4 1024 aaPredicted RBP6.4□□□□□ -1.38
VPS50-202ENST00000305866 WDHD1O75717 1129 aaPredicted RBP6.4□□□□□ -1.38
VPS50-202ENST00000305866 ZNF18P17022 549 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 TEFQ10587 303 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 NECTIN2Q92692 538 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 BRF1Q92994 677 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 DIAPH3Q9NSV4 1193 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 PCDHA7Q9UN72 937 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 DUOX1Q9NRD9 1551 aa6.4□□□□□ -1.38
VPS50-202ENST00000305866 TNRC6CQ9HCJ0 1690 aaKnown RBP6.4□□□□□ -1.39
VPS50-202ENST00000305866 HMGB1P09429 215 aaKnown RBP6.4□□□□□ -1.39
VPS50-202ENST00000305866 TAF1P21675 1872 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 KRT85P78386 507 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 DPCR1Q3MIW9 517 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 MSL3Q8N5Y2 521 aaKnown RBP6.4□□□□□ -1.39
VPS50-202ENST00000305866 USHBP1Q8N6Y0 703 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 IQUBQ8NA54 791 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 LINC00301Q8NCQ3 95 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 KLHDC4Q8TBB5 520 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 DDX11Q96FC9 970 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 ERO1AQ96HE7 468 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 TFIP11Q9UBB9 837 aaKnown RBP6.4□□□□□ -1.39
VPS50-202ENST00000305866 ARFGEF1Q9Y6D6 1849 aa6.4□□□□□ -1.39
VPS50-202ENST00000305866 SH2B2O14492 632 aaPredicted RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 PDCP20941 246 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 SARSP49591 514 aaKnown RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 ZNF165P49910 485 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 ESCO1Q5FWF5 840 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 ZMYM1Q5SVZ6 1142 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 LARP1BQ659C4 914 aaKnown RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 CEP135Q66GS9 1140 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 MPRIPQ6WCQ1 1025 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 FERMT3Q86UX7 667 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 FAM217BQ9NTX9 383 aaPredicted RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 IMPACTQ9P2X3 320 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 ORC3Q9UBD5 711 aaPredicted RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 U3KPZ7 1027 aaPredicted RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 PHLPP2Q6ZVD8 1323 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 PNMA6AP0CW24 399 aaPredicted RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 PDIA3P30101 505 aaKnown RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 ELF2Q15723 593 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 CCDC129Q6ZRS4 1044 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 CLIP2Q9UDT6 1046 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 BAZ2AQ9UIF9 1905 aaKnown RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 PCDH11XQ9BZA7 1347 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 PCDH11YQ9BZA8 1340 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 NDUFA8P51970 172 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 MUM1L1Q5H9M0 696 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 MB21D2Q8IYB1 491 aaPredicted RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 KBTBD3Q8NAB2 608 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 CCDC191Q8NCU4 936 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 ZNF274Q96GC6 653 aaPredicted RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 AK7Q96M32 723 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 FMNL2Q96PY5 1086 aa6.39□□□□□ -1.39
VPS50-202ENST00000305866 ZSCAN16Q9H4T2 348 aaPredicted RBP6.39□□□□□ -1.39
VPS50-202ENST00000305866 CCDC69A6NI79 296 aa6.38□□□□□ -1.39
VPS50-202ENST00000305866 NBPF26B4DH59 902 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms