RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 LINC00301Q8NCQ3 95 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 RTEL1Q9NZ71 1219 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 CLIC4Q9Y696 253 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 MRC1P22897 1456 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 CARMIL3Q8ND23 1372 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 CCP110O43303 1012 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 GPS2Q13227 327 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 TMEM139Q8IV31 216 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
ZNF558-201ENST00000301475 TMEM232C9JQI7 657 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 GRM8O00222 908 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 SLC3A2P08195 630 aaKnown RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 OTUD7BQ6GQQ9 843 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 RGPD8O14715 1765 aaPredicted RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 ZBTB9Q96C00 473 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 PARD6BQ9BYG5 372 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 DBNLQ9UJU6 430 aaKnown RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 ADAM21Q9UKJ8 722 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 TPM1P09493 284 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 FDPSP14324 419 aaKnown RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 LMAN1P49257 510 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 PPP2R3AQ06190 1150 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 GNL2Q13823 731 aaKnown RBP12.59□□□□□ -0.39
ZNF558-201ENST00000301475 KSR2Q6VAB6 950 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 SRLQ86TD4 932 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 ARFGAP3Q9NP61 516 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 PPP2R2CQ9Y2T4 447 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 MROH7-TTC4A0A0A0MT08 1334 aa12.59□□□□□ -0.39
ZNF558-201ENST00000301475 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
ZNF558-201ENST00000301475 STK38Q15208 465 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 DHX32Q7L7V1 743 aaKnown RBP12.58□□□□□ -0.4
ZNF558-201ENST00000301475 FBXO18Q8NFZ0 1043 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 AGXT2Q9BYV1 514 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
ZNF558-201ENST00000301475 ARHGAP23Q9P227 1491 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 IKBKBO14920 756 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 ZNF202O95125 648 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 NOP2P46087 812 aaKnown RBP12.58□□□□□ -0.4
ZNF558-201ENST00000301475 HSPA2P54652 639 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 UBASH3AP57075 661 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 TEFQ10587 303 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 GOLGA5Q8TBA6 731 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 EXOC4Q96A65 974 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 MPHOSPH8Q99549 860 aa12.58□□□□□ -0.4
ZNF558-201ENST00000301475 SLIT1O75093 1534 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
ZNF558-201ENST00000301475 VSTM4Q8IW00 320 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 KIFC2Q96AC6 838 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 UTYO14607 1347 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 TNNT3P45378 269 aaPredicted RBP12.57□□□□□ -0.4
ZNF558-201ENST00000301475 NLRP6P59044 892 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 GNG11P61952 73 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 EXOSC10Q01780 885 aaKnown RBP12.57□□□□□ -0.4
ZNF558-201ENST00000301475 SF3A1Q15459 793 aaKnown RBP12.57□□□□□ -0.4
ZNF558-201ENST00000301475 LONRF2Q1L5Z9 754 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 INTS13Q9NVM9 706 aa12.57□□□□□ -0.4
ZNF558-201ENST00000301475 RRP15Q9Y3B9 282 aaKnown RBP12.57□□□□□ -0.4
ZNF558-201ENST00000301475 DHX16O60231 1041 aaKnown RBP12.56□□□□□ -0.4
ZNF558-201ENST00000301475 PFKFB1P16118 471 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
ZNF558-201ENST00000301475 CASQ1P31415 396 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 CFAP100Q494V2 611 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 AK7Q96M32 723 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 EFCC1Q9HA90 598 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 PSD3Q9NYI0 1048 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 SPTLC2O15270 562 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 ATP5JP18859 108 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 EPHA10Q5JZY3 1008 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
ZNF558-201ENST00000301475 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
ZNF558-201ENST00000301475 FCHSD1Q86WN1 690 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 DHX58Q96C10 678 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 GJB4Q9NTQ9 266 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 BTBD11A6QL63 1104 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 MAP2K7O14733 419 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 ARHGAP6O43182 974 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 SERPINC1P01008 464 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 TOGARAM2Q6ZUX3 1019 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 KCNG4Q8TDN1 519 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 RABGGTAQ92696 567 aa12.56□□□□□ -0.4
ZNF558-201ENST00000301475 ZSCAN12O43309 604 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 ACTN2P35609 894 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 IQUBQ8NA54 791 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
ZNF558-201ENST00000301475 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
ZNF558-201ENST00000301475 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
ZNF558-201ENST00000301475 YEATS4O95619 227 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms