RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 EHBP1L1Q8N3D4 1523 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 HSF2BPO75031 334 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 BSPRYQ5W0U4 402 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 FANCIQ9NVI1 1328 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 GADL1Q6ZQY3 521 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 SESTD1Q86VW0 696 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 DDX17Q92841 729 aaKnown RBP11.25□□□□□ -0.61
TRIM44-201ENST00000299413 MED10Q9BTT4 135 aa11.25□□□□□ -0.61
TRIM44-201ENST00000299413 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
TRIM44-201ENST00000299413 NOC2LQ9Y3T9 749 aaKnown RBP11.24□□□□□ -0.61
TRIM44-201ENST00000299413 TEX13AQ9BXU3 409 aaPredicted RBP11.24□□□□□ -0.61
TRIM44-201ENST00000299413 PA2G4Q9UQ80 394 aaKnown RBP11.24□□□□□ -0.61
TRIM44-201ENST00000299413 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
TRIM44-201ENST00000299413 DNAJC21Q5F1R6 531 aaKnown RBP11.24□□□□□ -0.61
TRIM44-201ENST00000299413 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 GPATCH11Q8N954 259 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 KCNK9Q9NPC2 374 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 PPP1R7Q15435 360 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 PDCL2Q8N4E4 241 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 SKA2Q8WVK7 121 aaPredicted RBP11.24□□□□□ -0.61
TRIM44-201ENST00000299413 NEK1Q96PY6 1258 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
TRIM44-201ENST00000299413 ZBTB33Q86T24 672 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 AFG3L2Q9Y4W6 797 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 TRPC3Q13507 836 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 GOLGA1Q92805 767 aa11.24□□□□□ -0.61
TRIM44-201ENST00000299413 GTF2F1P35269 517 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM44-201ENST00000299413 USP37Q86T82 979 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 IRS4O14654 1257 aaPredicted RBP11.23□□□□□ -0.61
TRIM44-201ENST00000299413 CCDC172P0C7W6 258 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 STX17P56962 302 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
TRIM44-201ENST00000299413 PARP1P09874 1014 aaKnown RBP11.23□□□□□ -0.61
TRIM44-201ENST00000299413 SCAND2PQ9GZW5 306 aaPredicted RBP11.23□□□□□ -0.61
TRIM44-201ENST00000299413 ADGRL1O94910 1474 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 GMNNO75496 209 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 HSPA1LP34931 641 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 IL2RBP14784 551 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 RAD51AP2Q09MP3 1159 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 TBC1D31Q96DN5 1066 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 KIAA1107Q9UPP5 1409 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 HGSO14964 777 aaPredicted RBP11.23□□□□□ -0.61
TRIM44-201ENST00000299413 SF3A3Q12874 501 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM44-201ENST00000299413 ECHDC1Q9NTX5 307 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 GNG11P61952 73 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 NIM1KQ8IY84 436 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
TRIM44-201ENST00000299413 CASC4Q6P4E1 433 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 FNBP1Q96RU3 617 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 PRKAG2Q9UGJ0 569 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 CTNND2Q9UQB3 1225 aa11.23□□□□□ -0.61
TRIM44-201ENST00000299413 PSMD6Q15008 389 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 PIK3R4Q99570 1358 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 CCDC102BQ68D86 513 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
TRIM44-201ENST00000299413 KRT2P35908 639 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 NFATC2IPQ8NCF5 419 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 CGNQ9P2M7 1197 aaKnown RBP11.22□□□□□ -0.61
TRIM44-201ENST00000299413 SLC4A1P02730 911 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 KIF5AQ12840 1032 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 NAA25Q14CX7 972 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 SELENOOQ9BVL4 669 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 UBXN1Q04323 297 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 CCDC14Q49A88 953 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 WDR44Q5JSH3 913 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 PRPF31Q8WWY3 499 aaKnown RBP11.22□□□□□ -0.61
TRIM44-201ENST00000299413 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
TRIM44-201ENST00000299413 CCNT1O60563 726 aaKnown RBP11.22□□□□□ -0.61
TRIM44-201ENST00000299413 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 MTERF4Q7Z6M4 381 aaKnown RBP11.22□□□□□ -0.61
TRIM44-201ENST00000299413 LRRC27Q9C0I9 530 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 MBIPQ9NS73 344 aa11.22□□□□□ -0.61
TRIM44-201ENST00000299413 IFI16Q16666 785 aaKnown RBP11.21□□□□□ -0.61
TRIM44-201ENST00000299413 EYA3Q99504 573 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 MCM3P25205 808 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 USTQ9Y2C2 406 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 SLC8A3P57103 927 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 CCDC89Q8N998 374 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 MSANTD4Q8NCY6 345 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 PARD3BQ8TEW8 1205 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 C20orf194Q5TEA3 1177 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 GIMAP6Q6P9H5 292 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 CASKIN1Q8WXD9 1431 aa11.21□□□□□ -0.61
TRIM44-201ENST00000299413 STX10O60499 249 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 UBASH3AP57075 661 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 BRF1Q92994 677 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 H0YIN7 160 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 STRN3Q13033 797 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 NSMFQ6X4W1 530 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 PTPN23Q9H3S7 1636 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 CKAP4Q07065 602 aaKnown RBP11.21□□□□□ -0.62
TRIM44-201ENST00000299413 RMND1Q9NWS8 449 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 CACYBPQ9HB71 228 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms