RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 KRI1Q8N9T8 703 aaKnown RBP16.11■□□□□ 0.17
COL1A2-201ENST00000297268 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 SLC39A6Q13433 755 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 PZPP20742 1482 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 SGSM2O43147 1006 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 RXRAP19793 462 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 FANCCQ00597 558 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 GAS2L3Q86XJ1 694 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 IFT81Q8WYA0 676 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 VAV2P52735 878 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 ANKS4BQ8N8V4 417 aa16.1■□□□□ 0.17
COL1A2-201ENST00000297268 A0A1B0GUL7 405 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 TEX14Q8IWB6 1497 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 CYP7A1P22680 504 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 AKAP4Q5JQC9 854 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 NUP153P49790 1475 aaKnown RBP16.09■□□□□ 0.17
COL1A2-201ENST00000297268 KIF4AO95239 1232 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 CCDC122Q5T0U0 273 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 IMPACTQ9P2X3 320 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 A0A1W2PRG0 241 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 DTNBO60941 627 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 CHMP4BP1P59074 171 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 ARID5AQ03989 594 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 STXBP4Q6ZWJ1 553 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 AFAP1L1Q8TED9 768 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 TEX13AQ9BXU3 409 aaPredicted RBP16.09■□□□□ 0.17
COL1A2-201ENST00000297268 CRNKL1Q9BZJ0 848 aaKnown RBP16.09■□□□□ 0.17
COL1A2-201ENST00000297268 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 CCDC172P0C7W6 258 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 KRT2P35908 639 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
COL1A2-201ENST00000297268 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
COL1A2-201ENST00000297268 AOX1Q06278 1338 aa16.08■□□□□ 0.17
COL1A2-201ENST00000297268 SYCP3Q8IZU3 236 aa16.08■□□□□ 0.17
COL1A2-201ENST00000297268 IGSF22Q8N9C0 903 aa16.08■□□□□ 0.17
COL1A2-201ENST00000297268 FBF1Q8TES7 1133 aa16.08■□□□□ 0.17
COL1A2-201ENST00000297268 POGZQ7Z3K3 1410 aa16.08■□□□□ 0.17
COL1A2-201ENST00000297268 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.16
COL1A2-201ENST00000297268 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.16
COL1A2-201ENST00000297268 CDC37L1Q7L3B6 337 aa16.08■□□□□ 0.16
COL1A2-201ENST00000297268 HEATR3Q7Z4Q2 680 aa16.08■□□□□ 0.16
COL1A2-201ENST00000297268 CCDC114Q96M63 670 aa16.08■□□□□ 0.16
COL1A2-201ENST00000297268 BICC1Q9H694 974 aaKnown RBP16.08■□□□□ 0.16
COL1A2-201ENST00000297268 ARFGAP2Q8N6H7 521 aa16.08■□□□□ 0.16
COL1A2-201ENST00000297268 NAPGQ99747 312 aaPredicted RBP16.08■□□□□ 0.16
COL1A2-201ENST00000297268 SELENOSQ9BQE4 189 aa16.08■□□□□ 0.16
COL1A2-201ENST00000297268 TBCAO75347 108 aaKnown RBP16.08■□□□□ 0.16
COL1A2-201ENST00000297268 WDHD1O75717 1129 aaPredicted RBP16.08■□□□□ 0.16
COL1A2-201ENST00000297268 TBC1D5Q92609 795 aa16.08■□□□□ 0.16
COL1A2-201ENST00000297268 NEBLO76041 1014 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 CCT6AP40227 531 aaKnown RBP16.07■□□□□ 0.16
COL1A2-201ENST00000297268 C6orf163Q5TEZ5 329 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 BICDL2A1A5D9 508 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 ZPR1O75312 459 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 CFAP58Q5T655 872 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 CPLX4Q7Z7G2 160 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 TMOD2Q9NZR1 351 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 SCLT1Q96NL6 688 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 PAIP2Q9BPZ3 127 aaKnown RBP16.07■□□□□ 0.16
COL1A2-201ENST00000297268 LLPHQ9BRT6 129 aaKnown RBP16.07■□□□□ 0.16
COL1A2-201ENST00000297268 RIMS2Q9UQ26 1411 aa16.07■□□□□ 0.16
COL1A2-201ENST00000297268 BAG3O95817 575 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 KRT13P13646 458 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 SLF2Q8IX21 1173 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 IQUBQ8NA54 791 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 GPT2Q8TD30 523 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 HELLSQ9NRZ9 838 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 MAP3K5Q99683 1374 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 LDHCP07864 332 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 CCDC6Q16204 474 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 NEK11Q8NG66 645 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
COL1A2-201ENST00000297268 STMN4Q9H169 189 aaPredicted RBP16.06■□□□□ 0.16
COL1A2-201ENST00000297268 ZMYM3Q14202 1370 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 GSPT1P15170 499 aaKnown RBP16.05■□□□□ 0.16
COL1A2-201ENST00000297268 MCM7P33993 719 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 PKP1Q13835 747 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 FAM227BQ96M60 508 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 PLVAPQ9BX97 442 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 FLT4P35916 1363 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 NCOA5Q9HCD5 579 aaKnown RBP16.05■□□□□ 0.16
COL1A2-201ENST00000297268 TTF2Q9UNY4 1162 aaKnown RBP16.05■□□□□ 0.16
COL1A2-201ENST00000297268 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
COL1A2-201ENST00000297268 ATP10BO94823 1461 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 NPATQ14207 1427 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 TSPY3P0CV98 308 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 TSPY8P0CW00 308 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 OAS2P29728 719 aaKnown RBP16.05■□□□□ 0.16
COL1A2-201ENST00000297268 TUBB2AQ13885 445 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 TUBB2BQ9BVA1 445 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 PPP1R1BQ9UD71 204 aaPredicted RBP16.05■□□□□ 0.16
COL1A2-201ENST00000297268 KCNH3Q9ULD8 1083 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 RTL9Q8NET4 1388 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 STAMBPO95630 424 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 NLRP12P59046 1061 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 GBP6Q6ZN66 633 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
COL1A2-201ENST00000297268 TSGA10Q9BZW7 698 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms