RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 B4E1Z4 1266 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 NLRP5P59047 1200 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 CLIC6Q96NY7 704 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 AKAP2Q9Y2D5 859 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 MAST1Q9Y2H9 1570 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 PRAMEF22A3QJZ6 481 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 HOXC9P31274 260 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 CLEC17AQ6ZS10 378 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 CMTR1Q8N1G2 835 aaKnown RBP17.94■□□□□ 0.46
USP43-201ENST00000285199 THEMISQ8N1K5 641 aaPredicted RBP17.94■□□□□ 0.46
USP43-201ENST00000285199 TNNI3KQ59H18 835 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 ZNF710Q8N1W2 664 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 PRDM11Q9NQV5 511 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 SEPT11Q9NVA2 429 aaKnown RBP17.94■□□□□ 0.46
USP43-201ENST00000285199 STAP2Q9UGK3 403 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 FPGT-TNNI3KV9GXZ4 949 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 SCRN1Q12765 414 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 FANCLQ9NW38 375 aa17.94■□□□□ 0.46
USP43-201ENST00000285199 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
USP43-201ENST00000285199 FLT4P35916 1363 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 FAM170AA1A519 330 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 CACNA2D4Q7Z3S7 1137 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 CLIC4Q9Y696 253 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 ADD1P35611 737 aaKnown RBP17.93■□□□□ 0.46
USP43-201ENST00000285199 IGSF22Q8N9C0 903 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 TRMT112Q9UI30 125 aaKnown RBP17.93■□□□□ 0.46
USP43-201ENST00000285199 KCNH3Q9ULD8 1083 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 ATP1A3P13637 1013 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 USP5P45974 858 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
USP43-201ENST00000285199 GPHNQ9NQX3 736 aaPredicted RBP17.93■□□□□ 0.46
USP43-201ENST00000285199 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
USP43-201ENST00000285199 KCNH5Q8NCM2 988 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 TRIM47Q96LD4 638 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 KMT5BQ4FZB7 885 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 CT47A1Q5JQC4 288 aaPredicted RBP17.92■□□□□ 0.46
USP43-201ENST00000285199 MFSD6Q6ZSS7 791 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 CABP5Q9NP86 173 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 KCNJ14Q9UNX9 436 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
USP43-201ENST00000285199 PAFAH1B1P43034 410 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 RNASE9P60153 205 aaKnown RBP17.92■□□□□ 0.46
USP43-201ENST00000285199 MAATS1Q7Z4T9 603 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 MIGA1Q8NAN2 632 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 ATRIPQ8WXE1 791 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.92■□□□□ 0.46
USP43-201ENST00000285199 CEP170Q5SW79 1584 aa17.92■□□□□ 0.46
USP43-201ENST00000285199 RNF113AO15541 343 aaKnown RBP17.91■□□□□ 0.46
USP43-201ENST00000285199 AKR1B10O60218 316 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 KDM5AP29375 1690 aaKnown RBP17.91■□□□□ 0.46
USP43-201ENST00000285199 CCDC96Q2M329 555 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 CABLES1Q8TDN4 633 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 VAT1LQ9HCJ6 419 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 MACROD2A1Z1Q3 448 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 PFKFB1P16118 471 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 CLCN6P51797 869 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 HNRNPH2P55795 449 aaKnown RBP17.91■□□□□ 0.46
USP43-201ENST00000285199 ARID5AQ03989 594 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 GIMAP7Q8NHV1 300 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 PGBD1Q96JS3 809 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 PPP1R13BQ96KQ4 1090 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 CYP21A2P08686 494 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 TERF2Q15554 542 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 MAP4K1Q92918 833 aa17.91■□□□□ 0.46
USP43-201ENST00000285199 SNRPA1P09661 255 aaKnown RBP17.9■□□□□ 0.46
USP43-201ENST00000285199 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 MRFAP1L1Q96HT8 127 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 A0A1B0GUL7 405 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 TTC31Q49AM3 519 aaPredicted RBP17.9■□□□□ 0.46
USP43-201ENST00000285199 CCDC178Q5BJE1 867 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 TICAM2Q86XR7 235 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 PI4K2BQ8TCG2 481 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 CCDC196A0A1B0GTZ2 297 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 AKR1B15C9JRZ8 316 aaPredicted RBP17.9■□□□□ 0.46
USP43-201ENST00000285199 E7EWF7 191 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 USP8P40818 1118 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 EIF4A1P60842 406 aaKnown RBP17.9■□□□□ 0.46
USP43-201ENST00000285199 WTAPQ15007 396 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 BEND3Q5T5X7 828 aa17.9■□□□□ 0.46
USP43-201ENST00000285199 UBA7P41226 1012 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 IRX3P78415 501 aaPredicted RBP17.89■□□□□ 0.45
USP43-201ENST00000285199 IKQ13123 557 aaPredicted RBP17.89■□□□□ 0.45
USP43-201ENST00000285199 SLF1Q9BQI6 1058 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 NLRP12P59046 1061 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 RTN1Q16799 776 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 MYSM1Q5VVJ2 828 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 IQCEQ6IPM2 695 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 CTCFLQ8NI51 663 aaPredicted RBP17.89■□□□□ 0.45
USP43-201ENST00000285199 CHGBP05060 677 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 UBXN1Q04323 297 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 SPTLC3Q9NUV7 552 aa17.89■□□□□ 0.45
USP43-201ENST00000285199 CEP112Q8N8E3 955 aa17.88■□□□□ 0.45
USP43-201ENST00000285199 AOX1Q06278 1338 aa17.88■□□□□ 0.45
USP43-201ENST00000285199 TAF5LO75529 589 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms