RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 CHMP3Q9Y3E7 222 aa12.15□□□□□ -0.47
SEC24D-201ENST00000280551 BAG4O95429 457 aaKnown RBP12.14□□□□□ -0.47
SEC24D-201ENST00000280551 HCLS1P14317 486 aaPredicted RBP12.14□□□□□ -0.47
SEC24D-201ENST00000280551 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
SEC24D-201ENST00000280551 ZSCAN25Q6NSZ9 544 aa12.14□□□□□ -0.47
SEC24D-201ENST00000280551 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
SEC24D-201ENST00000280551 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
SEC24D-201ENST00000280551 AKT1S1Q96B36 256 aa12.14□□□□□ -0.47
SEC24D-201ENST00000280551 NBPF3Q9H094 633 aa12.14□□□□□ -0.47
SEC24D-201ENST00000280551 PIH1D3Q9NQM4 214 aaKnown RBP12.14□□□□□ -0.47
SEC24D-201ENST00000280551 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
SEC24D-201ENST00000280551 SNED1Q8TER0 1413 aa12.14□□□□□ -0.47
SEC24D-201ENST00000280551 SLC5A1P13866 664 aa12.14□□□□□ -0.47
SEC24D-201ENST00000280551 CHRNDQ07001 517 aa12.14□□□□□ -0.47
SEC24D-201ENST00000280551 PROM2Q8N271 834 aa12.14□□□□□ -0.47
SEC24D-201ENST00000280551 QTRT2Q9H974 415 aaKnown RBP12.14□□□□□ -0.47
SEC24D-201ENST00000280551 LARGE1O95461 756 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 PHKA1P46020 1223 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 NDUFB9Q9Y6M9 179 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
SEC24D-201ENST00000280551 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 NEUROD6Q96NK8 337 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 GBP4Q96PP9 640 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 DNAJC2Q99543 621 aaKnown RBP12.13□□□□□ -0.47
SEC24D-201ENST00000280551 TPCN1Q9ULQ1 816 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 PKP1Q13835 747 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 JAKMIP1Q96N16 626 aaKnown RBP12.13□□□□□ -0.47
SEC24D-201ENST00000280551 MTA3Q9BTC8 594 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 CNNM1Q9NRU3 951 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 MINPP1Q9UNW1 487 aa12.13□□□□□ -0.47
SEC24D-201ENST00000280551 BAZ2AQ9UIF9 1905 aaKnown RBP12.12□□□□□ -0.47
SEC24D-201ENST00000280551 HOXA10P31260 410 aaPredicted RBP12.12□□□□□ -0.47
SEC24D-201ENST00000280551 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
SEC24D-201ENST00000280551 ME3Q16798 604 aa12.12□□□□□ -0.47
SEC24D-201ENST00000280551 SPATA5Q8NB90 893 aa12.12□□□□□ -0.47
SEC24D-201ENST00000280551 UPF3BQ9BZI7 483 aaKnown RBP12.12□□□□□ -0.47
SEC24D-201ENST00000280551 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
SEC24D-201ENST00000280551 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
SEC24D-201ENST00000280551 MYH2Q9UKX2 1941 aa12.12□□□□□ -0.47
SEC24D-201ENST00000280551 KRT27Q7Z3Y8 459 aa12.12□□□□□ -0.47
SEC24D-201ENST00000280551 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
SEC24D-201ENST00000280551 LMBRD1Q9NUN5 540 aa12.12□□□□□ -0.47
SEC24D-201ENST00000280551 GYS1P13807 737 aa12.11□□□□□ -0.47
SEC24D-201ENST00000280551 IGHMBP2P38935 993 aaKnown RBP12.11□□□□□ -0.47
SEC24D-201ENST00000280551 RBM6P78332 1123 aaKnown RBP12.11□□□□□ -0.47
SEC24D-201ENST00000280551 CCDC129Q6ZRS4 1044 aa12.11□□□□□ -0.47
SEC24D-201ENST00000280551 MB21D2Q8IYB1 491 aaPredicted RBP12.11□□□□□ -0.47
SEC24D-201ENST00000280551 LLPHQ9BRT6 129 aaKnown RBP12.11□□□□□ -0.47
SEC24D-201ENST00000280551 GNPATO15228 680 aa12.11□□□□□ -0.47
SEC24D-201ENST00000280551 FGRP09769 529 aa12.11□□□□□ -0.47
SEC24D-201ENST00000280551 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
SEC24D-201ENST00000280551 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
SEC24D-201ENST00000280551 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■□□□ 14.5
SEC24D-201ENST00000280551 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.11□□□□□ -0.47
SEC24D-201ENST00000280551 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
SEC24D-201ENST00000280551 TAF7LQ5H9L4 462 aa12.11□□□□□ -0.47
SEC24D-201ENST00000280551 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
SEC24D-201ENST00000280551 ANAPC4Q9UJX5 808 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
SEC24D-201ENST00000280551 PFKFB2O60825 505 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 PDE6AP16499 860 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 DHX32Q7L7V1 743 aaKnown RBP12.1□□□□□ -0.47
SEC24D-201ENST00000280551 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
SEC24D-201ENST00000280551 ZNF330Q9Y3S2 320 aaPredicted RBP12.1□□□□□ -0.47
SEC24D-201ENST00000280551 E7EWF7 191 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 KLHL40Q2TBA0 621 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 ZNF274Q96GC6 653 aaPredicted RBP12.1□□□□□ -0.47
SEC24D-201ENST00000280551 SETDB2Q96T68 719 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 CTNNA3Q9UI47 895 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 MYH6P13533 1939 aa12.1□□□□□ -0.47
SEC24D-201ENST00000280551 HSP90AA2PQ14568 343 aaPredicted RBP12.09□□□□□ -0.47
SEC24D-201ENST00000280551 NFIXQ14938 502 aa12.09□□□□□ -0.47
SEC24D-201ENST00000280551 TRAPPC3LQ5T215 181 aa12.09□□□□□ -0.47
SEC24D-201ENST00000280551 MEX3CQ5U5Q3 659 aaKnown RBP12.09□□□□□ -0.47
SEC24D-201ENST00000280551 ANKRD18AQ8IVF6 992 aa12.09□□□□□ -0.47
SEC24D-201ENST00000280551 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
SEC24D-201ENST00000280551 ANKRD2Q9GZV1 360 aa12.09□□□□□ -0.47
SEC24D-201ENST00000280551 PI16Q6UXB8 463 aa12.09□□□□□ -0.47
SEC24D-201ENST00000280551 TPTE2Q6XPS3 522 aa12.09□□□□□ -0.47
SEC24D-201ENST00000280551 C10orf71Q711Q0 1435 aa12.09□□□□□ -0.47
SEC24D-201ENST00000280551 WDR33Q9C0J8 1336 aaKnown RBP12.09□□□□□ -0.47
SEC24D-201ENST00000280551 NT5C2P49902 561 aa12.08□□□□□ -0.47
SEC24D-201ENST00000280551 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.47
SEC24D-201ENST00000280551 CELF1Q92879 486 aaKnown RBP12.08□□□□□ -0.47
SEC24D-201ENST00000280551 GPAA1O43292 621 aa12.08□□□□□ -0.48
SEC24D-201ENST00000280551 ZNF384Q8TF68 577 aa12.08□□□□□ -0.48
SEC24D-201ENST00000280551 FAM84BQ96KN1 310 aaPredicted RBP12.08□□□□□ -0.48
SEC24D-201ENST00000280551 MPHOSPH8Q99549 860 aa12.08□□□□□ -0.48
SEC24D-201ENST00000280551 SIPA1L1O43166 1804 aa12.08□□□□□ -0.48
SEC24D-201ENST00000280551 POLRMTO00411 1230 aaKnown RBP12.08□□□□□ -0.48
SEC24D-201ENST00000280551 ZPR1O75312 459 aa12.08□□□□□ -0.48
SEC24D-201ENST00000280551 FGAP02671 866 aa12.08□□□□□ -0.48
SEC24D-201ENST00000280551 TRAK2O60296 914 aa12.08□□□□□ -0.48
SEC24D-201ENST00000280551 CPA1P15085 419 aa12.07□□□□□ -0.48
SEC24D-201ENST00000280551 GNAT2P19087 354 aa12.07□□□□□ -0.48
SEC24D-201ENST00000280551 GRAPQ13588 217 aa12.07□□□□□ -0.48
SEC24D-201ENST00000280551 PRR5LQ6MZQ0 368 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms